I. Information of ICE

ICEberg ID	232
Name	ICESsu(BM407)1
Organism	Streptococcus suis BM407
Size (bp)	75717
GC content [Genome] (%)	37.81[41.06]
Insertion site	luciferase-like monooxygenase (SSUBM407_0455)
Function	Tetracycline resistance
Species that ICE can be transferred to	-
Nucleotide Sequence	FM252032 (complete ICE sequence in this genome)
Replicon	chromosome (2146229 bp, BioProject:32237) [NC_012926]
Genome coordinates	504649..580365
Putative oriT region	-
Putative relaxase	coordinates: 549580..550785; Locus tag: SSUBM407_0491;  Family:  MOBT

II. ICE interaction with IME/CIME/

The interaction information of ICESsu(BM407)1 is not available.

The graph information of ICESsu(BM407)1 components from FM252032
Complete gene list of ICESsu(BM407)1 from FM252032
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	SSUBM407_0452	500726..501883 [+], 1158	putative exported protein
2	SSUBM407_0453	501864..502559 [+], 696	ABC transporter ATP-binding protein
3	SSUBM407_0454	502560..503807 [+], 1248	putative permease
4	SSUBM407_0455	503933..580966 [+], 77034	luciferase-like monooxygenase (pseudogene)
5	SSUBM407_0456	504649..504822 [+], 174	hypothetical protein
6	SSUBM407_0457	504819..505637 [+], 819	replication initiator protein A protein
7	SSUBM407_0458	505786..507141 [+], 1356	C-5 cytosine-specific DNA methylase
8	SSUBM407_0459	507125..507553 [+], 429	hypothetical protein
9	SSUBM407_0460	507564..507947 [+], 384	hypothetical protein
10	SSUBM407_0461	507950..508189 [+], 240	hypothetical protein
11	SSUBM407_0462	508192..508776 [+], 585	CAAX amino terminal protease family protein
12	SSUBM407_0463	508854..509342 [+], 489	hypothetical protein
13	SSUBM407_0464	509342..511159 [+], 1818	putative conjugal transfer protein TraG
14	SSUBM407_0465	511177..511419 [+], 243	putative membrane protein
15	SSUBM407_0466	511438..512292 [+], 855	putative TrbL/VirB6 plasmid conjugal transfer protein
16	SSUBM407_0467	512354..512707 [+], 354	putative membrane protein
17	SSUBM407_0468	512685..515015 [+], 2331	hypothetical protein	PrgJ, T4SS component
18	SSUBM407_0469	515017..517818 [+], 2802	hypothetical protein	PrgK, T4SS component
19	SSUBM407_0470	518157..518792 [+], 636	hypothetical protein
20	SSUBM407_0471	518952..523847 [+], 4896	putative glucan-binding surface-anchored protein	PrgB, T4SS component
21	SSUBM407_0471a	523848..524039 [+], 192	hypothetical protein
22	SSUBM407_0472	524023..524574 [+], 552	hypothetical protein
23	SSUBM407_0473	524624..531469 [+], 6846	hypothetical protein
24	SSUBM407_0474	531540..531839 [+], 300	hypothetical protein
25	SSUBM407_0475	531853..532152 [+], 300	putative membrane protein
26	SSUBM407_0476	532197..533084 [-], 888	integrase	Integrase
27	SSUBM407_0477	533176..534126 [+], 951	putative D-alanine--D-alanine ligase
28	SSUBM407_0478	534107..535402 [-], 1296	hypothetical protein
29	SSUBM407_0479	535571..536788 [-], 1218	integrase
30	SSUBM407_0479a	536870..537073 [-], 204	excisionase
31	SSUBM407_0480	537534..537764 [-], 231	hypothetical protein
32	SSUBM407_0481	537761..538183 [-], 423	putative DNA-binding protein
33	SSUBM407_0482	538688..539041 [+], 354	DNA-binding protein
34	tetM1	539387..541306 [-], 1920	tetracycline resistance protein TetM 1
35	SSUBM407_0484	541683..542615 [-], 933	putative membrane protein	Orf13_Tn, T4SS component
36	SSUBM407_0485	542612..543613 [-], 1002	putative exported protein	Orf14_Tn, T4SS component
37	SSUBM407_0486	543610..545787 [-], 2178	putative membrane protein	Orf15_Tn, T4SS component
38	SSUBM407_0487	545790..548237 [-], 2448	hypothetical protein	Orf16_Tn, T4SS component
39	SSUBM407_0488	548221..548727 [-], 507	putative membrane protein	Orf17_Tn, T4SS component
40	SSUBM407_0489	548702..549199 [-], 498	antirestriction protein
41	SSUBM407_0490	549316..549537 [-], 222	putative membrane protein	Orf19_Tn, T4SS component
42	SSUBM407_0491	549580..550785 [-], 1206	replication initiation factor	Relaxase, MOBT Family
43	SSUBM407_0492	550963..552348 [-], 1386	FtsK/SpoIIIE family protein	Orf21_Tn, T4SS component
44	SSUBM407_0493	552377..552763 [-], 387	hypothetical protein
45	SSUBM407_0494	552779..553093 [-], 315	hypothetical protein
46	SSUBM407_0495	553409..554452 [-], 1044	hypothetical protein
47	SSUBM407_0496	554587..555225 [+], 639	putative exported protein
48	SSUBM407_0497	555264..556340 [+], 1077	DNA primase
49	SSUBM407_0498	556394..556621 [+], 228	hypothetical protein
50	SSUBM407_0499	556618..557007 [+], 390	hypothetical protein
51	SSUBM407_0500	556997..557353 [+], 357	hypothetical protein
52	SSUBM407_0501	557362..557670 [-], 309	hypothetical protein
53	SSUBM407_0502	557657..558007 [-], 351	hypothetical protein
54	SSUBM407_0503	558004..559419 [-], 1416	UmuC-like DNA-repair protein
55	SSUBM407_0504	559562..560254 [-], 693	putative DNA-binding protein
56	SSUBM407_0505	561071..561250 [+], 180	bacteriocin
57	SSUBM407_0506	561888..562247 [+], 360	hypothetical protein
58	SSUBM407_0507	562257..562622 [+], 366	putative mobilisation protein
59	SSUBM407_0508	562609..564474 [+], 1866	puative relaxase protein
60	SSUBM407_0509	564518..565222 [-], 705	haloacid dehalogenase-like hydrolase
61	lacR2	565231..565992 [-], 762	lactose phosphotransferase system repressor 2
62	glkA2	566172..567122 [+], 951	glucokinase 2
63	lacA2	567358..567783 [+], 426	galactose-6-phosphate isomerase subunit LacA 2
64	lacB2	567817..568332 [+], 516	galactose-6-phosphate isomerase subunit LacB 2
65	lacC2	568344..569276 [+], 933	tagatose-6-phosphate kinase 2
66	lacD2	569279..570259 [+], 981	tagatose 1,6-diphosphate aldolase 2
67	lacF2	570287..570604 [+], 318	lactose-specific phosphotransferase enzyme IIA component 2
68	lacE2	570604..572298 [+], 1695	PTS system lactose-specific EIICB component 2
69	lacG2	572364..573770 [+], 1407	6-phospho-beta-galactosidase 2
70	lacX2	573858..574754 [+], 897	protein LacX 2
71	SSUBM407_0520	575001..575231 [+], 231	putative DNA-binding protein
72	SSUBM407_0521	575492..575632 [+], 141	hypothetical protein
73	SSUBM407_0522	575731..577305 [+], 1575	site-specific recombinase
74	SSUBM407_0523	577305..578924 [+], 1620	site-specific recombinase
75	SSUBM407_0524	578917..580365 [+], 1449	site-specific recombinase
76	SSUBM407_0455	503933..580966 [+], 77034	luciferase-like monooxygenase (pseudogene)
77	SSUBM407_0525	581166..581402 [-], 237	hypothetical protein
78	lysS	581554..583044 [-], 1491	lysyl-tRNA synthetase
79	SSUBM407_0527	583147..583773 [-], 627	phosphoglycerate mutase family protein
80	SSUBM407_0528	583776..584258 [-], 483	conserved hypothetical protein
81	SSUBM407_0529	584258..585100 [-], 843	putative membrane protein

Flanking regions

(1) Palmieri C; Varaldo PE; Facinelli B (2011). Streptococcus suis, an Emerging Drug-Resistant Animal and Human Pathogen. Front Microbiol. 0.246527778. [PubMed:22275909]

(2) Holden MT; Hauser H; Sanders M; Ngo TH; Cherevach I; Cronin A; Goodhead I; Mungall K; Quail MA; Price C; Rabbinowitsch E; Sharp S; Croucher NJ; Chieu TB; Mai NT; Diep TS; Chinh NT; Kehoe M; Leigh JA; Ward PN; Dowson CG; Whatmore AM; Chanter N; Iversen P; Gottschalk M; Slater JD; Smith HE; Spratt BG; Xu J; Ye C; Bentley S; Barrell BG; Schultsz C; Maskell DJ; Parkhill J (2009). Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suis. PLoS One. 4(7):e6072. [PubMed:19603075]