I. Information of ICE

ICEberg ID	225
Name	ICEA(5632)-II
ICEO ID	ICEO_0000159
Organism	Mycoplasma agalactiae 5632
Size (bp)	27171
GC content [Genome] (%)	27.39[29.62]
Insertion site	-
Function	-
Species that ICE can be transferred to	-
Nucleotide Sequence	FP671138 (complete ICE sequence in this genome)
Replicon	-
Genome coordinates	343591..370761
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of ICEA(5632)-II is not available.

The graph information of ICEA(5632)-II components from FP671138
Complete gene list of ICEA(5632)-II from FP671138
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	MAGa2960	338596..340806 [+], 2211	Putative transmembrane protein
2	MAGa2970	340838..343414 [+], 2577	Conserved hypothetical protein, predictedlipoprotein
3	MAGa2980	343591..344385 [+], 795	CDS1
4	MAGa2990	345625..346638 [+], 1014	CDSA
5	MAGa3000	346644..347048 [+], 405	CDS12
6	MAGa3010	347064..347729 [+], 666	CDS11
7	MAGa3030	347766..348218 [+], 453	CDSB
8	MAGa3040	348307..348867 [+], 561	CDSC
9	MAGa3050	348920..349573 [+], 654	CDSD
10	MAGa3060	349668..351680 [+], 2013	CDS5	T4CP
11	MAGa3070	351730..352710 [+], 981	CDS7
12	MAGa3080	352859..353113 [+], 255	CDS13
13	MAGa3090	353116..353481 [+], 366	CDS15
14	MAGa3100	353486..354109 [+], 624	CDS16 N terminal part
15	MAGa3110	354073..354561 [+], 489	C treminal part of CDS16 Previouslycharacterized CDS (tr Q1IH56); Marenda M., Barbe V.,Gourgues G., Mangenot S., Sagne E., Citti C., A newintegrative conjugative element occurs in Mycoplasmaagalactiae as chromosomal and free circular forms. J.Bacteriol. 188:4137 4141(2006).)
16	MAGa3120	354708..355148 [+], 441	CDS27
17	MAGa3130	355135..357921 [+], 2787	CDS17
18	MAGa3140	357927..362480 [+], 4554	CDS19
19	MAGa3150	362855..363307 [+], 453	CDSE
20	MAGa3160	363625..365199 [+], 1575	CDS14
21	MAGa3170	365325..366587 [-], 1263	CDSF
22	MAGa3180	366758..367111 [-], 354	Hypothetical protein
23	MAGa3190	367202..368041 [-], 840	CDSG
24	MAGa3200	368232..368903 [-], 672	CDSH
25	MAGa3210	368890..369084 [-], 195	-
26	MAGa3220	369688..370761 [+], 1074	CDS22	Integrase
27	MAGa3230	371003..373219 [+], 2217	Conserved hypothetical protein, predictedtransmembrane protein
28	MAGa3240	373427..375715 [+], 2289	Putative transmembrane protein

Flanking regions

(1) Dordet Frisoni E; Marenda MS; Sagne E; Nouvel LX; Guerillot R; Glaser P; Blanchard A; Tardy F; Sirand-Pugnet P; Baranowski E; Citti C (2013). ICEA of Mycoplasma agalactiae: a new family of self-transmissible integrative elements that confers conjugative properties to the recipient strain. Mol Microbiol. 89(6):1226-39. [PubMed:23888872]

(2) Nouvel LX; Sirand-Pugnet P; Marenda MS; Sagne E; Barbe V; Mangenot S; Schenowitz C; Jacob D; Barre A; Claverol S; Blanchard A; Citti C (2010). Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity. BMC Genomics. 0.518055556. [PubMed:20122262]