ICEberg
I. Information of ICE
ICEberg ID194
Name ICE(Tn4371)6035 This is a predicted ICE derived from literature
OrganismCongregibacter litoralis KT71
Size (bp)50661
GC content [Genome] (%)59.52
Insertion siteTTTTTTAT
FunctionAcriflavine resistance
Species that ICE can be transferred to-
Nucleotide SequenceNZ_AAOA01000008 (complete ICE sequence in this contig)
Replicon-
Coordinates133371..184030 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICE(Tn4371)6035 is not available.



The graph information of ICE(Tn4371)6035 components from NZ_AAOA01000008
Complete gene list of ICE(Tn4371)6035 from NZ_AAOA01000008
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1KT71_12345130887..133283 [+], 2397TonB-dependent receptor
2KT71_12350133554..134753 [+], 1200prophage integraseIntegrase 
3KT71_12355134890..135264 [+], 375Protein of unknown function DUF1044
4KT71_12360135254..135559 [+], 306DNA-binding protein
5KT71_12365135726..136403 [+], 678hypothetical protein
6KT71_12370136544..137731 [+], 1188hypothetical protein
7KT71_12375137777..138565 [-], 789membrane protein
8KT71_12380138572..139474 [-], 903hypothetical protein
9KT71_12385139563..140750 [+], 1188hypothetical protein
10KT71_12390140747..143002 [+], 2256hypothetical protein
11KT71_12395143048..144118 [+], 1071hypothetical protein
12KT71_12400144486..144995 [+], 510radC-like protein yeeS
13KT71_12405145158..146321 [-], 1164hypothetical protein
14KT71_12410146611..148413 [-], 1803hypothetical protein
15KT71_12415148410..149585 [-], 1176hypothetical protein
16KT71_12420149713..150000 [-], 288transcription regulator protein
17KT71_12425150286..150615 [+], 330hypothetical protein
18KT71_12430150938..151735 [+], 798hypothetical protein
19KT71_12435151804..152103 [+], 300hypothetical protein
20KT71_12440152130..152975 [+], 846replication protein RepA
21KT71_12445153262..153900 [+], 639protein containing CobQ/CobB/MinD/ParA nucleotid e binding domain
22KT71_12450153897..154148 [+], 252hypothetical protein
23KT71_12455154145..154678 [+], 534conserved hypothetical protein, secreted
24KT71_12460154774..155262 [+], 489Conjugal transfer protein traF precursorTraF, T4SS component 
25KT71_12465155675..157669 [+], 1995hypothetical protein
26KT71_12470157753..158211 [-], 4594-hydroxyphenylacetate 3-monooxygenase, reductase component
27KT71_12475158275..159162 [-], 888hypothetical protein
28KT71_12480159146..160093 [-], 948Bacterial luciferase
29KT71_12485160177..161340 [-], 1164Transposase, IS204/IS1001/IS1096/IS1165
30KT71_12490161467..161859 [-], 393conserved hypothetical protein, membrane
31KT71_12495162613..162927 [+], 315transcriptional regulator, ArsR family protein
32KT71_12500163192..163848 [-], 657Transcriptional regulator, TetR family protein
33KT71_12505163939..165141 [+], 1203Acriflavine resistance protein A (Precursor)
34KT71_12510165095..168328 [+], 3234acriflavine resistance protein B
35KT71_12515168393..169922 [+], 1530RND efflux system, outer membrane lipoprotein
36KT71_12520169937..170881 [+], 945transcriptional regulator, LysR family protein
37KT71_12525170878..171138 [+], 261secreted protein
38KT71_12530171375..173372 [+], 1998Conjugal transfer protein traGVirD4, T4SS component 
39KT71_12535173369..173857 [+], 489Helix-turn-helix protein, CopG family protein
40KT71_12540173854..174924 [+], 1071conjugal transfer protein trbBTrbB, T4SS component 
41KT71_12545174975..175307 [+], 333Conjugal transfer protein TrbCTrbC, T4SS component 
42KT71_12550175304..175573 [+], 270conjugal transfer trbD transmembrane proteinTrbD, T4SS component 
43KT71_12555175586..178036 [+], 2451Conjugal transfer protein trbE precursorTrbE, T4SS component 
44KT71_12560178033..178776 [+], 744Conjugal transfer protein trbJ (Precursor)TrbJ, T4SS component 
45KT71_12565178789..179103 [+], 315hypothetical proteinTrbJ, T4SS component 
46KT71_12570179100..180488 [+], 1389TrbL/VirB6 plasmid conjugal transfer proteinTrbL, T4SS component 
47KT71_12575180506..181210 [+], 705Conjugal transfer protein trbFTrbF, T4SS component 
48KT71_12580181207..182211 [+], 1005Conjugal transfer protein TrbG/VirB9/CagXTrbG, T4SS component 
49KT71_12585182214..183491 [+], 1278Bacterial conjugation TrbI-like proteinTrbI, T4SS component 
50KT71_12590183488..183733 [+], 246hypothetical protein
51KT71_12595184148..184408 [-], 261secreted protein
52KT71_12600184500..185876 [-], 1377protein containing Metallo-dependent hydrolase domain
53KT71_12605185967..187469 [+], 1503Sulfatase
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins49Fasta
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PubMed:19941653] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU