 ICEberg ID | 18 |
Name  | ICEVchInd1  |
| ICEO ID | ICEO_0000629 |
| Organism | Vibrio cholerae O1 BI142 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Trimethoprim-sulfamethoxazole resistence |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | EF434308; EF434290 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEVchInd1 components from EF434290 | |||||
 | |||||
| Incomplete gene list of ICEVchInd1 from EF434290 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | traG | 1..144 [+], 144 | TraG | TraG_F, T4SS component | |
The graph information of ICEVchInd1 components from EF434308 | |||||
 | |||||
| Incomplete gene list of ICEVchInd1 from EF434308 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | eexR1 | 1..432 [+], 432 | EexR1 | ||
|
(1) Bordeleau E; Brouillette E; Robichaud N; Burrus V (2010). Beyond antibiotic resistance: integrating conjugative elements of the SXT/R391 family that encode novel diguanylate cyclases participate to c-di-GMP signalling in Vibrio cholerae. Environ Microbiol. 12(2):510-23. [PubMed:19888998]
|
|
(2) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PubMed:17307849]
|
| experimental literature |