ICEberg
I. Information of ICE
ICEberg ID178
Name ICEPaeC3719-1 This is a putative ICE identified in this study by Blast
OrganismPseudomonas aeruginosa C3719
Size (bp)78296
GC content [Genome] (%)61.4
Insertion sitetRNA-Lys (Lys47)
Function-
Species that ICE can be transferred to-
Nucleotide SequenceNW_001999377 (complete ICE sequence in this genome)
Replicon-
Genome coordinates5416255..5494550 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEPaeC3719-1 is not available.



The graph information of ICEPaeC3719-1 components from NW_001999377
Complete gene list of ICEPaeC3719-1 from NW_001999377
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1PACG_048325412007..5412384 [-], 378hypothetical protein
2PACG_048335412486..5413511 [-], 1026RNA 3'-terminal phosphate cyclase
3PACG_048345413508..5414320 [-], 813hypothetical protein
4PACG_048355414357..5415571 [-], 1215hypothetical protein
5PACG_048365415627..5416772 [-], 1146hypothetical protein
6PACG_048375417432..5419027 [+], 1596transcriptional regulator RtcR
7PACG_048385419083..5419637 [+], 555hypothetical protein
8PACG_048395419631..5421487 [-], 1857hypothetical protein
9PACG_048405421547..5422035 [-], 489hypothetical protein
10PACG_048415422270..5422596 [+], 327hypothetical protein
11PACG_048425422695..5425063 [+], 2369hypothetical protein
12PACG_048435426077..5426681 [+], 605peptidyl-prolyl cis-trans isomerase FklB
13PACG_048445426754..5428781 [-], 2028hypothetical protein
14PACG_048465429574..5430542 [-], 969octaprenyl-diphosphate synthase
15PACG_048475430783..5431094 [+], 31250S ribosomal protein L21
16PACG_048485431118..5431375 [+], 25850S ribosomal protein L27
17PACG_048495431517..5432737 [+], 1221GTP-binding protein Obg
18PACG_048505432808..5433926 [+], 1119glutamate 5-kinase
19PACG_048515433938..5434402 [+], 465hypothetical protein
20PACG_048525434469..5434744 [-], 27630S ribosomal protein S20
21PACG_048535435028..5436566 [+], 1539hypothetical protein
22PACG_048545436663..5437601 [+], 939riboflavin kinase/FAD synthase
23PACG_048555437625..5440456 [+], 2832isoleucyl-tRNA synthetase
24PACG_048565440449..5440958 [+], 510prolipoprotein signal peptidase
25PACG_048575440951..5441391 [+], 441hypothetical protein
26PACG_048585441477..5442421 [+], 945LytB protein
27PACG_048595442490..5442915 [-], 426type 4 fimbrial biogenesis protein PilE
28PACG_048605442912..5443244 [-], 333type 4 fimbrial biogenesis protein PilY2
29PACG_048615443241..5446753 [-], 3513type 4 fimbrial biogenesis protein PilY1
30PACG_048625446731..5447336 [-], 606type 4 fimbrial biogenesis protein PilX
31PACG_048635447333..5448187 [-], 855type 4 fimbrial biogenesis protein PilW
32PACG_048645448157..5448681 [-], 525Type 4 fimbrial biogenesis protein PilV
33PACG_048655448691..5449179 [-], 489FimU
34PACG_048665449302..5449802 [-], 501FimT
35PACG_048675449960..5451036 [+], 1077hypothetical protein
36PACG_048685451082..5452419 [-], 1338two-component response regulator PilR
37PACG_048695452434..5454026 [-], 1593two-component sensor PilS
38PACG_048705454418..5455443 [-], 1026competence protein ComL
39PACG_048715455589..5456551 [+], 963pseudouridine synthase
40PACG_048725456548..5457276 [+], 729hypothetical protein
41PACG_048735457432..5459996 [+], 2565ClpB protein
42PACG_048755460848..5462140 [-], 1293integrase
43PACG_048765462137..5464056 [-], 1920hypothetical protein
44PACG_048775464929..5465279 [-], 351plasmid stablization protein
45PACG_048785465283..5465555 [-], 273hypothetical protein
46PACG_048795466023..5467537 [-], 1515hypothetical protein
47PACG_048805467534..5467881 [-], 348hypothetical protein
48PACG_048815467881..5469263 [-], 1383hypothetical protein
49PACG_048825469281..5470219 [-], 939hypothetical protein
50PACG_048835470219..5470650 [-], 432hypothetical protein
51PACG_048845470859..5471077 [+], 219hypothetical protein
52PACG_048855471074..5471733 [-], 660hypothetical protein
53PACG_048865471730..5472014 [-], 285hypotehtical protein
54PACG_048875472011..5474953 [-], 2943hypothetical protein
55PACG_048885474953..5475396 [-], 444hypothetical protein
56PACG_048895475374..5476879 [-], 1506hypothetical protein
57PACG_048905476863..5477747 [-], 885hypothetical protein
58PACG_048915477744..5478403 [-], 660hypothetical protein
59PACG_048925478400..5478786 [-], 387hypothetical protein
60PACG_048935478797..5479153 [-], 357hypothetical protein
61PACG_048945479171..5479404 [-], 234hypothetical protein
62PACG_048955479407..5479766 [-], 360hypothetical protein
63PACG_048965479839..5480144 [-], 306hypothetical protein
64PACG_048975480253..5481734 [-], 1482hypothetical protein
65PACG_048985481745..5482491 [-], 747hypothetical protein
66PACG_048995482491..5484722 [-], 2232hypothetical protein
67PACG_049005484726..5484995 [-], 270dTDP-D-glucose 4,6-dehydratase
68PACG_049015485004..5485504 [-], 501hypothetical protein
69PACG_049025485501..5486082 [-], 582hypothetical protein
70PACG_049035486067..5486822 [-], 756hypothetical protein
71PACG_049045486833..5487522 [-], 690hypothetical protein
72PACG_049055489311..5489514 [-], 204hypothetical protein
73PACG_049065489511..5490107 [-], 597hypothetical protein
74PACG_049075490092..5490682 [-], 591hypothetical protein
75PACG_049085491563..5492246 [-], 684hypothetical protein
76PACG_049095492351..5492782 [+], 432ultraviolet light resistance protein A
77PACG_049105492769..5494043 [+], 1275ultraviolet light resistance protein B, interruption-C
78PACG_049115494727..5496982 [-], 2256hypothetical protein
79PACG_049125497081..5498526 [-], 1446hypothetical protein
80PACG_049135498556..5499161 [-], 606hypothetical protein
81PACG_049145499253..5499507 [-], 255hypothetical protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins0Fasta
Identified as part of this study from NW_001999377

Genomics & Bioinformatics Group in MML, SJTU