ICEberg
I. Information of ICE
ICEberg ID173
Name pKLC102 This ICE is derived from experimental literature
ICEO ID ICEO_0000116
OrganismPseudomonas aeruginosa C
Size (bp)103532
GC content [Genome] (%)60.93
Insertion sitetRNA-Lys
Function-
Species that ICE can be transferred to-
Nucleotide SequenceAY257538 (complete ICE sequence in this GenBank file)
Replicon-
Coordinates1..103532 
Putative oriT region -
Putative relaxase coordinates: 99964..101883; Locus tag: CP102;  Family:  MOBH


II. ICE interaction with IME/CIME/

The interaction information of pKLC102 is not available.



The graph information of pKLC102 components from AY257538
Complete gene list of pKLC102 from AY257538
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1soj113..997 [+], 885Soj
2CP2999..1724 [+], 726hypothetical protein
3CP31721..2218 [+], 498hypothetical protein
4CP42224..2970 [+], 747hypothetical protein
5CP52967..3653 [+], 687conserved hypothetical protein
6CP63653..4354 [+], 702conserved hypothetical protein
7CP74351..5058 [+], 708CP7
8CP85042..5260 [+], 219CP8
9dnaB5323..6600 [+], 1278DnaB
10CP107039..7395 [-], 357hypothetical protein
11CP117838..8365 [+], 528CP11
12CP128362..8619 [+], 258CP12
13CP138612..9109 [+], 498CP13
14CP149102..9335 [+], 234conserved hypothetical protein
15CP159335..10351 [+], 1017conserved hypothetical protein
16CP1610348..10602 [+], 255putative DNA binding protein
17CP1710599..12332 [+], 1734conserved hypothetical protein
18CP1812360..13115 [+], 756conserved hypothetical protein
19CP1915766..16494 [+], 729hypothetical protein
20CP2016500..17048 [+], 549conserved hypothetical protein
21CP2117095..17934 [+], 840putative antirepressor
22ssb17964..18452 [+], 489Ssb
23CP2318871..19152 [-], 282CP23
24CP2419289..19549 [-], 261CP24
25CP2519571..19981 [-], 411putative nucleic acid binding protein
26CP2619981..20211 [-], 231putative virulence-associated protein
27topA20467..22386 [+], 1920putative TopA topoisomerase
28cspA22694..22903 [+], 210CspA
29CP2923124..25013 [+], 1890hypothetical protein
30CP3025010..26983 [+], 1974putative helicase
31CP3127105..27887 [+], 783putative ABC transporter ATP-binding protein
32CP3227920..29173 [+], 1254hypothetical protein
33pilL29347..30471 [+], 1125PilLTfc2, T4SS component 
34pilN30471..32180 [+], 1710PilN
35pilO32298..33509 [+], 1212PilO
36pilP33499..34032 [+], 534PilP
37pilQ34041..35621 [+], 1581PilQTraJ_I, T4SS component 
38pilR35621..36700 [+], 1080PilR
39pilS36779..37252 [+], 474PilS
40pilU37249..38190 [+], 942PilUTraJ_I, T4SS component 
41pilV38195..39523 [+], 1329PilV
42pilM39552..39989 [+], 438PilM
43CP4340911..41300 [+], 390CP43
44CP4441373..41552 [+], 180CP44
45CP4541554..41688 [+], 135CP45
46CP4642012..42491 [+], 480conserved hypothetical protein
47CP4742861..43058 [+], 198conserved hypothetical protein
48CP4843163..43441 [+], 279CP48
49CP4943544..44251 [+], 708conserved hypothetical protein
50CP5044487..44837 [+], 351conserved hypothetical protein
51CP5144894..45685 [+], 792conserved hypothetical protein
52CP5245788..46150 [+], 363conserved hypothetical protein
53CP5346218..46472 [+], 255conserved hypothetical protein
54CP5446564..47169 [+], 606conserved hypothetical protein
55CP5547199..48644 [+], 1446hypothetical protein
56CP5648743..50998 [+], 2256putative helicase
57CP5751579..52364 [-], 786putative polyketide synthase
58CP5852303..52644 [-], 342conserved hypothetical protein
59CP5952739..53299 [-], 561putative TetR family transcriptional regulator protein
60CP6053362..54147 [-], 786putative reductase protein
61CP6154303..54716 [-], 414TetR family transcriptional regulator-like protein
62CP62a54709..55560 [-], 852phage integrase-like protein
63CP62b54904..55407 [+], 504CP62b
64CP6356331..57023 [+], 693conserved hypothetical protein
65CP6457034..57789 [+], 756conserved hypothetical proteinTfc3, T4SS component 
66CP6557774..58355 [+], 582hypothetical proteinTfc4, T4SS component 
67CP6658352..58852 [+], 501conserved hypothetical proteinTfc5, T4SS component 
68CP6759134..61365 [+], 2232putative TraG family conjugative proteinTfc6, T4SS component 
69CP6861365..62111 [+], 747conserved hypothetical proteinTfc8, T4SS component 
70CP6962122..63603 [+], 1482putative helicaseTraI_F, T4SS component 
71CP7063735..64844 [+], 1110hypothetical protein
72CP7164889..65200 [-], 312conserved hypothetical protein
73CP7265373..65672 [+], 300CP72
74CP7365883..66104 [+], 222hypothetical proteinTfc9, T4SS component 
75CP7466107..66340 [+], 234hypothetical protein
76CP7566358..66714 [+], 357hypothetical proteinTfc10, T4SS component 
77CP7666725..67111 [+], 387hypothetical proteinTfc11, T4SS component 
78CP7767108..67767 [+], 660conserved hypothetical proteinTfc12, T4SS component 
79CP7867764..68648 [+], 885conserved hypothetical proteinTfc13, T4SS component 
80CP7968710..70137 [+], 1428conserved hypothetical proteinTfc14, T4SS component 
81CP8070211..70558 [+], 348hypothetical proteinTfc15, T4SS component 
82CP8170558..73500 [+], 2943conserved hypothetical proteinTfc16, T4SS component 
83CP8273497..73781 [+], 285hypothetical protein
84CP8373778..74434 [+], 657hypothetical outer membrane protein
85CP8475208..76395 [+], 1188putative flavoprotein reductase
86CP8576418..76840 [+], 423hypothetical protein
87cheR76830..77696 [+], 867CheR
88CP8777834..78265 [+], 432putative integral membrane proteinTfc24, T4SS component 
89CP8878265..79203 [+], 939conserved hypothetical proteinTfc23, T4SS component 
90CP8979038..80603 [+], 1566putative integral membrane proteinTfc22, T4SS component 
91CP9080603..80950 [+], 348hypothetical protein
92CP9180947..82482 [+], 1536conserved hypothetical proteinTfc19, T4SS component 
93CP9282924..83256 [+], 333NikR family transcriptional regulator protein-like protein
94CP9383260..83610 [+], 351hypothetical protein
95chvB83988..92501 [-], 8514ChvB
96CP9593343..93567 [+], 225hypothetical protein
97CP9693782..94501 [+], 720putative cAMP regulatory protein
98CP9794572..94934 [+], 363CP97
99CP9894852..95532 [+], 681CP98
100CP9995641..97659 [+], 2019fusion protein
101CP10097815..99008 [-], 1194putative fatty acid desaturase
102CP10199396..99752 [+], 357hypothetical protein
103CP10299964..101883 [+], 1920conserved hypothetical proteinRelaxase, MOBH Family
104xerC101880..103163 [+], 1284XerCIntegrase 
105CP103b101970..102476 [-], 507CP103b
 

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins105Fasta
(1) Klockgether J; Reva O; Larbig K; Tummler B (2004). Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa C. J Bacteriol. 186(2):518-34. [PubMed:14702321] experimental
 
experimental experimental literature

Genomics & Bioinformatics Group in MML, SJTU