I. Information of ICE

ICEberg ID	157
Name	pSE211 {AICE}
ICEO ID	ICEO_0000746
Organism	Saccharopolyspora erythraea NRRL 2338
Size (bp)	17255
GC content [Genome] (%)	68.99[71.15]
Insertion site	tRNA-Phe(SACE_8046)
Function	-
Species that ICE can be transferred to	-
Nucleotide Sequence	AM420293 (complete ICE sequence in this genome)
Replicon	chromosome (8212805 bp, BioProject:18489) [NC_009142]
Genome coordinates	7823295..7840549
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of pSE211 {AICE} is not available.

The graph information of pSE211 {AICE} components from AM420293
Complete gene list of pSE211 {AICE} from AM420293
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	SACE_7000	7818396..7818518 [+], 123	hypothetical protein
2	SACE_7001	7818744..7820195 [-], 1452	transcriptional regulator/aminotransferase
3	SACE_7002	7820251..7820928 [+], 678	protein of unknown function DUF161
4	SACE_7003	7821039..7821386 [-], 348	hypothetical protein
5	SACE_7004	7821466..7823109 [-], 1644	ABC transporter, ATP-binding component
6	SACE_7006	7823972..7824727 [-], 756	secreted protein
7	SACE_7007	7825079..7825630 [+], 552	metal dependent phosphohydrolase
8	SACE_7008	7825982..7826080 [+], 99	hypothetical protein
9	SACE_7009	7826104..7826691 [-], 588	transcriptional regulator, XRE family
10	SACE_7010	7827044..7827244 [+], 201	hypothetical protein
11	SACE_7011	7827771..7828064 [+], 294	hypothetical protein
12	SACE_7012	7828064..7828279 [+], 216	hypothetical protein
13	SACE_7013	7828279..7828716 [+], 438	hypothetical protein
14	SACE_7014	7828766..7828945 [+], 180	hypothetical protein
15	SACE_7015	7828964..7829224 [+], 261	hypothetical protein
16	SACE_7016	7829271..7829531 [+], 261	hypothetical protein
17	SACE_7017	7829585..7829845 [+], 261	hypothetical protein
18	SACE_7018	7829880..7830269 [+], 390	uncharacterized P-loop ATPase protein UPF0042
19	SACE_7019	7830284..7830469 [+], 186	hypothetical protein
20	SACE_7020	7830560..7830886 [+], 327	hypothetical protein
21	SACE_7021	7830901..7831116 [+], 216	hypothetical protein
22	SACE_7022	7831140..7831964 [+], 825	hypothetical protein
23	SACE_7023	7831961..7834141 [+], 2181	hypothetical protein
24	SACE_7024	7834283..7834537 [+], 255	hypothetical protein
25	SACE_7025	7834565..7834738 [+], 174	hypothetical protein
26	SACE_7026	7834765..7835028 [+], 264	hypothetical protein
27	SACE_7027	7835114..7835722 [+], 609	PAS:GGDEF
28	SACE_7028	7835759..7836772 [+], 1014	hypothetical protein
29	SACE_7029	7836799..7837473 [+], 675	hypothetical protein
30	SACE_7030	7837506..7838822 [+], 1317	possible phiRv2 prophage protein
31	SACE_7031	7838819..7839115 [+], 297	hypothetical protein
32	int	7839127..7840440 [+], 1314	integrase (recombinase)	Integrase
33	cprA	7841143..7841757 [-], 615	transcriptional regulator
34	SACE_7034	7842020..7842259 [-], 240	hypothetical protein
35	SACE_7035	7842555..7842767 [+], 213	heavy metal transport/detoxification protein
36	SACE_7036	7843201..7843881 [+], 681	hypothetical protein
37	acdH	7844023..7845174 [-], 1152	acyl-CoA dehydrogenase

Flanking regions

(1) Bordeleau E; Brouillette E; Robichaud N; Burrus V (2010). Beyond antibiotic resistance: integrating conjugative elements of the SXT/R391 family that encode novel diguanylate cyclases participate to c-di-GMP signalling in Vibrio cholerae. Environ Microbiol. 12(2):510-23. [PubMed:19888998]

(2) te Poele EM; Samborskyy M; Oliynyk M; Leadlay PF; Bolhuis H; Dijkhuizen L (2008). Actinomycete integrative and conjugative pMEA-like elements of Amycolatopsis and Saccharopolyspora decoded. Plasmid. 59(3):202-16. [PubMed:18295883]

(3) Oliynyk M; Samborskyy M; Lester JB; Mironenko T; Scott N; Dickens S; Haydock SF; Leadlay PF (2007). Complete genome sequence of the erythromycin-producing bacterium Saccharopolyspora erythraea NRRL23338. Nat Biotechnol. 25(4):447-53. [PubMed:17369815]

(4) Brown DP; Idler KB; Katz L (1990). Characterization of the genetic elements required for site-specific integration of plasmid pSE211 in Saccharopolyspora erythraea. J Bacteriol. 172(4):1877-88. [PubMed:2180909]

(5) Katz L; Brown DP; Donadio S (1991). Site-specific recombination in Escherichia coli between the att sites of plasmid pSE211 from Saccharopolyspora erythraea. Mol Gen Genet. 227(1):155-9. [PubMed:2046656]

experimental literature

in silico analysis literature