 ICEberg ID | 139 |
Name  | ICEVchVie0  |
| ICEO ID | ICEO_0000626 |
| Organism | Vibrio cholerae O1 90 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Sulphametoxazol, chloramphenicol;trimethoprim, streptomycin and tetracycline resistance |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | DQ499467 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEVchVie0 components from DQ499467 | |||||
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| Incomplete gene list of ICEVchVie0 from DQ499467 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | tnp | 429..1025 [+], 597 | putative transposase | ||
| 2 | tnpA | 1139..2752 [+], 1614 | truncated transposase | ||
| 3 | s021 | 2220..2942 [-], 723 | unknown | ||
| 4 | rumA | 3372..3768 [-], 397 | UV repair protein | ||
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(1) Spagnoletti M; Ceccarelli D; Colombo MM (2012). Rapid detection by multiplex PCR of Genomic Islands, prophages and Integrative Conjugative Elements in V. cholerae 7th pandemic variants. J Microbiol Methods. 88(1):98-102. [PubMed:22062086]
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(2) Bani S; Mastromarino PN; Ceccarelli D; Le Van A; Salvia AM; Ngo Viet QT; Hai DH; Bacciu D; Cappuccinelli P; Colombo MM (2007). Molecular characterization of ICEVchVie0 and its disappearance in Vibrio cholerae O1 strains isolated in 2003 in Vietnam. FEMS Microbiol Lett. 266(1):42-8. [PubMed:17233716]
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| experimental literature |