ICEberg
I. Information of ICE
ICEberg ID1104
Name ICEMoSym(WSM2075)-β This is a predicted ICE derived from literature
OrganismMesorhizobium opportunistum WSM2075
Size (bp)22972
GC content [Genome] (%)-
Insertion site-
Functionβ region of the tripartite ICE
Species that ICE can be transferred to-
Nucleotide SequenceNC_015675 (complete ICE sequence in this genome)
Replicon-
Genome coordinates2836947..2859919 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMoSym(WSM2075)-β is not available.



The graph information of ICEMoSym(WSM2075)-β components from NC_015675
Complete gene list of ICEMoSym(WSM2075)-β from NC_015675
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1MESOP_RS135652832780..2834069 [+], 1290RsmB/NOP family class I SAM-dependent RNA methyltransferase
2MESOP_RS135702834210..2834668 [+], 459PaaI family thioesterase
3MESOP_RS135752834668..2835333 [+], 6665'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
4MESOP_RS135802835389..2836951 [+], 1563glutamine-hydrolyzing GMP synthase
5MESOP_RS135852837269..2838522 [+], 1254site-specific integraseIntegrase 
6MESOP_RS336102838503..2838757 [-], 255AlpA family phage regulatory protein
7MESOP_RS346652839882..2840337 [+], 456hypothetical protein
8MESOP_RS136052842491..2843213 [+], 723autoinducer-binding protein
9MESOP_RS136102843309..2843860 [+], 552hypothetical protein
10MESOP_RS136152843919..2845388 [+], 1470tyrosinase family protein
11MESOP_RS136202845421..2845990 [+], 570hypothetical protein
12MESOP_RS136252846243..2846605 [+], 363hypothetical protein
13MESOP_RS136302846815..2847486 [+], 672autoinducer synthase
14MESOP_RS336152847511..2847924 [+], 414hypothetical protein
15MESOP_RS136352847988..2850093 [+], 2106multicopper oxidase
16MESOP_RS136402850123..2850497 [+], 375hypothetical protein
17MESOP_RS136452850959..2852176 [-], 1218hypothetical protein
18MESOP_RS136502852331..2852756 [+], 426hypothetical protein
19MESOP_RS136652854772..2857096 [-], 2325alpha/beta hydrolase
20MESOP_RS336202857326..2857553 [-], 228hypothetical protein
21MESOP_RS136702857550..2858743 [-], 1194IS91 family transposase
22MESOP_RS136802859804..2861102 [-], 1299integrase
23MESOP_RS136852861115..2861363 [-], 249hypothetical protein
24MESOP_RS136952862456..2862791 [+], 336hypothetical protein
25MESOP_RS137052863727..2864428 [+], 702GntR family transcriptional regulator
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins17Fasta
(1) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PubMed:27733511]
 

Genomics & Bioinformatics Group in MML, SJTU