I. Information of ICE

ICEberg ID	1101
Name	ICEMcSym(1271)-β
ICEO ID	ICEO_0000189
Organism	Mesorhizobium ciceri WSM1271
Size (bp)	22972
GC content [Genome] (%)	-
Insertion site	-
Function	β region of the tripartite ICE
Species that ICE can be transferred to	-
Nucleotide Sequence	NC_014923 (complete ICE sequence in this genome)
Replicon	-
Genome coordinates	2669947..2692919
Putative oriT region	-
Putative relaxase	-

II. ICE interaction with IME/CIME/

The interaction information of ICEMcSym(1271)-β is not available.

The graph information of ICEMcSym(1271)-β components from NC_014923
Complete gene list of ICEMcSym(1271)-β from NC_014923
#	Gene	Coordinates [+/-], size (bp)	Product  (GenBank annotation)	*Reannotation
1	Mesci_2544	2665642..2666931 [+], 1290	Fmu (Sun) domain-containing protein
2	Mesci_2545	2666901..2667014 [-], 114	hypothetical protein
3	Mesci_2546	2667072..2667530 [+], 459	thioesterase superfamily protein
4	Mesci_2547	2667672..2668340 [+], 669	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
5	Mesci_2548	2668389..2669951 [+], 1563	GMP synthase large subunit
6	Mesci_2549	2670269..2671522 [+], 1254	integrase family protein	Integrase
7	Mesci_2550	2671503..2671757 [-], 255	prophage CP4-57 regulator
8	Mesci_2554	2675491..2676213 [+], 723	autoinducer-binding domain-containing protein
9	Mesci_2555	2676309..2676860 [+], 552	hypothetical protein
10	Mesci_2556	2676919..2678388 [+], 1470	tyrosinase
11	Mesci_2557	2678421..2678990 [+], 570	hypothetical protein
12	Mesci_2558	2679243..2679605 [+], 363	hypothetical protein
13	Mesci_2559	2679815..2680486 [+], 672	autoinducer synthesis protein
14	Mesci_2560	2680511..2680924 [+], 414	hypothetical protein
15	Mesci_2561	2680988..2683093 [+], 2106	multicopper oxidase type 2
16	Mesci_2562	2683123..2683497 [+], 375	blue (type 1) copper domain-containing protein
17	Mesci_2563	2683959..2685176 [-], 1218	hypothetical protein
18	Mesci_2564	2685331..2685756 [+], 426	hypothetical protein
19	Mesci_2567	2687772..2690096 [-], 2325	hypothetical protein
20	Mesci_2568	2690326..2690553 [-], 228	hypothetical protein
21	Mesci_2569	2690550..2691644 [-], 1095	transposase
22	Mesci_2571	2692618..2693226 [+], 609	hypothetical protein
23	Mesci_2572	2693320..2694132 [-], 813	NAD-dependent epimerase/dehydratase
24	Mesci_2573	2694136..2695338 [-], 1203	class I and II aminotransferase
25	Mesci_2574	2695335..2696954 [-], 1620	5-oxoprolinase

Flanking regions

(1) Haskett TL; Ramsay JP; Bekuma AA; Sullivan JT; O'Hara GW; Terpolilli JJ (2017). Evolutionary persistence of tripartite integrative and conjugative elements. Plasmid. 92:30-36. [PubMed:28669811]

(2) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PubMed:27733511]

(3) Reeve W; Nandasena K; Yates R; Tiwari R; O'Hara G; Ninawi M; Gu W; Goodwin L; Detter C; Tapia R; Han C; Copeland A; Liolios K; Chen A; Markowitz V; Pati A; Mavromatis K; Woyke T; Kyrpides N; Ivanova N; Howieson J (2013). Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)). Stand Genomic Sci. 9(2):410-9. [PubMed:24976896]

(4) Reeve W; Nandasena K; Yates R; Tiwari R; O'Hara G; Ninawi M; Chertkov O; Goodwin L; Bruce D; Detter C; Tapia R; Han S; Woyke T; Pitluck S; Nolan M; Land M; Copeland A; Liolios K; Pati A; Mavromatis K; Markowitz V; Kyrpides N; Ivanova N; Goodwin L; Meenakshi U; Howieson J (2013). Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.). Stand Genomic Sci. 9(2):294-303. [PubMed:24976886]

experimental literature

in silico analysis literature