ICEberg
I. Information of ICE
ICEberg ID1096
Name ICEMcSym(1271)-α This ICE is derived from experimental literature
ICEO ID ICEO_0000188
OrganismMesorhizobium ciceri WSM1271
Size (bp)445,220
GC content [Genome] (%)-
Insertion site-
Functionα region of the tripartite ICE
Species that ICE can be transferred to-
Nucleotide SequenceNC_014923 (complete ICE sequence in this genome)
Replicon-
Genome coordinates5680050..6125270 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of ICEMcSym(1271)-α is not available.



The graph information of ICEMcSym(1271)-α components from NC_014923
Complete gene list of ICEMcSym(1271)-α from NC_014923
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1Mesci_54855675543..5676313 [-], 771hypothetical protein
2Mesci_54865676523..5678136 [-], 1614LuxR family transcriptional regulator
3Mesci_54875678723..5679799 [-], 1077LuxR family transcriptional regulator
4Mesci_54885680715..5680990 [+], 276hypothetical protein
5Mesci_54895680992..5681366 [+], 375helix-turn-helix domain-containing protein
6Mesci_54905681359..5682384 [+], 1026hypothetical protein
7Mesci_54915682384..5683055 [+], 672peptidase C1A papain
8Mesci_54925683048..5683824 [+], 777hypothetical protein
9Mesci_54935683917..5684186 [+], 270hypothetical protein
10Mesci_54945684167..5684703 [+], 537hypothetical protein
11Mesci_54955684703..5685368 [+], 666dUTP pyrophosphatase
12Mesci_54965685369..5685785 [+], 417hypothetical protein
13Mesci_54975685789..5686379 [+], 591hypothetical protein
14Mesci_54985686543..5687691 [+], 1149MazG nucleotide pyrophosphohydrolase
15Mesci_54995687688..5688356 [+], 669uracil-DNA glycosylase
16Mesci_55005688776..5688982 [-], 207hypothetical protein
17Mesci_55015689546..5690733 [-], 1188UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase
18Mesci_55025690857..5691144 [-], 288hypothetical protein
19Mesci_55035691578..5691733 [-], 156cbb3-type cytochrome oxidase maturation protein
20Mesci_55045691733..5694018 [-], 2286copper-translocating P-type ATPase
21Mesci_55055694015..5694512 [-], 498FixH family protein
22Mesci_55065694509..5696068 [-], 1560cytochrome C oxidase accessory protein CcoG
23Mesci_55075696207..5697070 [-], 864cytochrome C oxidase cbb3-type subunit III
24Mesci_55085697073..5697222 [-], 150nitrogen fixation protein FixQ
25Mesci_55095697233..5697964 [-], 732cytochrome C oxidase cbb3-type subunit II
26Mesci_55105697955..5699583 [-], 1629cytochrome C oxidase cbb3-type subunit I
27Mesci_55115700027..5700776 [-], 750Crp family transcriptional regulator
28Mesci_55125700932..5702278 [+], 1347oxygen-independent coproporphyrinogen III oxidase
29Mesci_55135702411..5702683 [-], 273hypothetical protein
30Mesci_55145702686..5703906 [-], 1221conjugation TrbI family proteinTrbI, T4SS component 
31Mesci_55155703920..5704948 [-], 1029ATPase PTrbG, T4SS component 
32Mesci_55165704938..5705669 [-], 732conjugal transfer protein TrbFTrbF, T4SS component 
33Mesci_55175705670..5706992 [-], 1323P-type conjugative transfer protein TrbLTrbL, T4SS component 
34Mesci_55185707021..5707746 [-], 726ATPase PTrbJ, T4SS component 
35Mesci_55195707752..5710193 [-], 2442type IV transporter system CagE/TrbE/VirBTrbE, T4SS component 
36Mesci_55205710187..5710459 [-], 273type IV secretory pathway VirB3 family proteinTrbD, T4SS component 
37Mesci_55215710459..5710767 [-], 309conjugal transfer protein TrbcTrbC, T4SS component 
38Mesci_55225710779..5711747 [-], 969P-type conjugative transfer ATPase TrbBTrbB, T4SS component 
39Mesci_55235711744..5712157 [-], 414CopG/DNA-binding domain-containing protein
40Mesci_55245712273..5714303 [-], 2031TRAG family proteinVirD4, T4SS component 
41Mesci_55255714504..5716327 [-], 1824glucosamine/fructose-6-phosphate aminotransferase
42Mesci_55265716589..5716846 [-], 258hypothetical protein
43Mesci_55275717079..5719049 [-], 1971hypothetical protein
44Mesci_55285719231..5719914 [-], 684lytic transglycosylaseTrbN, T4SS component 
45Mesci_55295719902..5720450 [-], 549peptidase S26, conserved regionTraF, T4SS component 
46Mesci_55305720447..5720686 [-], 240hypothetical protein
47Mesci_55315720831..5721154 [-], 324hypothetical proteinTraF, T4SS component 
48Mesci_55325721686..5723413 [-], 1728parB-like partition protein
49Mesci_55335723497..5723907 [-], 411hypothetical protein
50Mesci_55345724043..5725005 [-], 963hypothetical protein
51Mesci_55355725710..5726384 [-], 675DSBA oxidoreductase
52Mesci_55365727217..5727984 [-], 768transmembrane protein
53Mesci_55375728327..5728569 [-], 243hypothetical protein
54Mesci_55385728569..5728754 [-], 186hypothetical protein
55Mesci_55395728965..5729159 [+], 195hypothetical protein
56Mesci_55405729473..5729697 [-], 225hypothetical protein
57Mesci_55415729950..5730084 [-], 135hypothetical protein
58Mesci_55425730136..5730228 [+], 93hypothetical protein
59Mesci_55435730329..5730538 [+], 210hypothetical protein
60Mesci_55445731645..5731797 [+], 153hypothetical protein
61Mesci_55455731997..5732254 [+], 258hypothetical protein
62Mesci_55465732276..5732656 [+], 381hypothetical protein
63Mesci_55475733031..5733654 [-], 624hypothetical protein
64Mesci_55485733854..5734204 [+], 351hypothetical protein
65Mesci_55495735046..5735264 [-], 219hypothetical protein
66Mesci_55505735275..5735463 [-], 189hypothetical protein
67Mesci_55515735572..5735757 [-], 186Zinc finger, C2H2-like protein
68Mesci_55535736709..5736924 [+], 216hypothetical protein
69Mesci_55545737252..5737497 [-], 246hypothetical protein
70Mesci_55555737507..5737740 [-], 234hypothetical protein
71Mesci_55565737817..5738536 [+], 720hypothetical protein
72Mesci_55575738604..5738846 [+], 243hypothetical protein
73Mesci_55585739371..5739655 [+], 285hypothetical protein
74Mesci_55605740742..5741476 [-], 7357-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE
75Mesci_55615741473..5741829 [-], 357hypothetical protein
76Mesci_55625741829..5742527 [-], 699exsB protein
77Mesci_55635742823..5743212 [+], 390hypothetical protein
78Mesci_55645743439..5743693 [-], 255helix-turn-helix domain-containing protein
79Mesci_55665745189..5746130 [+], 942exoV; pyruvyltransferase protein
80Mesci_55675746438..5747919 [+], 1482polysaccharide biosynthesis protein
81Mesci_55685747952..5748968 [+], 1017polysaccharide polymerisation protein
82Mesci_55695748965..5749774 [+], 810galactosyltransferase protein
83Mesci_55705750413..5751006 [+], 594short-chain dehydrogenase/reductase SDR
84Mesci_55715751024..5751650 [+], 627hypothetical protein
85Mesci_55725752209..5752844 [-], 636acyl-homoserine-lactone synthase
86Mesci_55735752939..5753664 [-], 726autoinducer-binding domain-containing protein
87Mesci_55745753824..5754687 [-], 864pantoate/beta-alanine ligase
88Mesci_55755754684..5755520 [-], 8373-methyl-2-oxobutanoate hydroxymethyltransferase
89Mesci_55765755695..5756657 [+], 963hypothetical protein
90Mesci_55775756722..5757696 [+], 975quinolinate synthetase complex subunit alpha
91Mesci_55785757693..5759234 [+], 1542L-aspartate oxidase
92Mesci_55795759236..5760114 [+], 879nicotinate-nucleotide pyrophosphorylase
93Mesci_55805760301..5761311 [+], 1011biotin synthase
94Mesci_55815761308..5762447 [+], 11408-amino-7-oxononanoate synthase
95Mesci_55825762444..5763079 [+], 636dethiobiotin synthase
96Mesci_55835763079..5764344 [+], 1266adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA
97Mesci_55845764323..5765324 [+], 1002beta-ketoacyl-acyl-carrier-protein synthase III
98Mesci_55855765660..5767306 [+], 1647hypothetical protein
99Mesci_55865767382..5768668 [-], 1287HipA domain-containing protein
100Mesci_55875768665..5768997 [-], 333helix-turn-helix domain-containing protein
101Mesci_55885769981..5770733 [+], 753carbonic anhydrase
102Mesci_55895770905..5773349 [+], 2445ATPase domain-containing protein
103Mesci_55905773468..5774508 [-], 1041ATPase PVirB11, T4SS component 
104Mesci_55915774492..5775634 [-], 1143conjugation TrbI family proteinVirB10, T4SS component 
105Mesci_55925775631..5776512 [-], 882P-type conjugative transfer protein VirB9VirB9, T4SS component 
106Mesci_55935776509..5777222 [-], 714type IV secretory pathway component VirB8 proteinVirB8, T4SS component 
107Mesci_55945777219..5777377 [-], 159type IV secretion system lipoprotein VirB7VirB7, T4SS component 
108Mesci_55955777400..5778287 [-], 888TrbL/VirB6 plasmid conjugal transfer proteinVirB6, T4SS component 
109Mesci_55965778346..5779029 [-], 684type IV secretion system protein VirB5VirB5, T4SS component 
110Mesci_55975779042..5781411 [-], 2370type IV secretion/conjugal transfer ATPaseVirB4, T4SS component 
111Mesci_55985781411..5781737 [-], 327type IV secretory pathway VirB3 family proteinVirB3, T4SS component 
112Mesci_55995781737..5782102 [-], 366conjugal transfer protein TrbcVirB2, T4SS component 
113Mesci_56005782117..5782890 [-], 774lytic transglycosylaseVirB1, T4SS component 
114Mesci_56015783330..5783893 [+], 564hypothetical protein
115Mesci_56025784124..5784849 [+], 726response regulator receiver
116Mesci_56045786705..5787271 [+], 567hypothetical protein
117Mesci_56055787493..5790675 [-], 3183peptidase C48 SUMO/Sentrin/Ubl1
118Mesci_56065790775..5792520 [-], 1746TRAG family proteinVirD4, T4SS component 
119Mesci_56075792756..5793622 [-], 867hypothetical protein
120Mesci_56085796057..5796623 [-], 567hypothetical protein
121Mesci_56095796625..5796969 [-], 345hypothetical protein
122Mesci_56105797159..5798124 [-], 966LysR family transcriptional regulator
123Mesci_56115798615..5799886 [+], 1272capsule synthesis protein CapA
124Mesci_56125799895..5800026 [+], 132hypothetical protein
125Mesci_56135800019..5801464 [+], 1446amidohydrolase
126Mesci_56155802289..5803434 [+], 1146alanine racemase
127Mesci_56165803535..5804347 [+], 813ABC transporter
128Mesci_56175804392..5805174 [+], 783family 3 extracellular solute-binding protein
129Mesci_56185805307..5806059 [+], 753polar amino acid ABC transporter inner membrane subunit
130Mesci_56195806059..5806865 [+], 807polar amino acid ABC transporter inner membrane subunit
131Mesci_56205806910..5807830 [+], 921arginase
132Mesci_56215807834..5808907 [+], 1074ornithine cyclodeaminase
133Mesci_56225808904..5809890 [+], 987amidinotransferase
134Mesci_56235809906..5810709 [+], 804amidinotransferase
135Mesci_56245811240..5812121 [+], 882ribosomal L11 methyltransferase
136Mesci_56255812846..5813877 [+], 1032hypothetical protein
137Mesci_56265814306..5815733 [+], 1428hypothetical protein
138Mesci_56275816144..5816935 [-], 792hypothetical protein
139Mesci_56305819813..5820148 [+], 336hypothetical protein
140Mesci_56315820141..5821388 [+], 1248HipA domain-containing protein
141Mesci_56325821647..5822507 [+], 861hypothetical protein
142Mesci_56345823666..5825003 [+], 1338glycine hydroxymethyltransferase
143Mesci_56355825058..5826233 [+], 1176S-adenosylmethionine synthetase
144Mesci_56365826341..5827333 [+], 993PfkB domain-containing protein
145Mesci_56385829012..5830046 [+], 1035L-threonine 3-dehydrogenase
146Mesci_56405831385..5831852 [+], 468ROSMUCR transcriptional regulator
147Mesci_56415832051..5833406 [+], 1356oxygen-independent coproporphyrinogen III oxidase
148Mesci_56435834879..5835091 [-], 213cold-shock protein
149Mesci_56445835695..5836063 [+], 369hypothetical protein
150Mesci_56455836069..5837361 [+], 1293cytochrome P450
151Mesci_56485838505..5839842 [+], 1338cytochrome P450
152Mesci_56495839994..5840992 [+], 999polyprenyl synthetase
153Mesci_56505841289..5842839 [+], 1551prenyltransferase/squalene oxidase
154Mesci_56515842836..5843738 [+], 903hypothetical protein
155Mesci_56525843823..5844872 [+], 1050isopentenyl-diphosphate delta-isomerase
156Mesci_56545846388..5847503 [+], 1116response regulator receiver
157Mesci_56555848123..5848335 [+], 213hypothetical protein
158Mesci_56565849253..5850569 [-], 1317HipA domain-containing protein
159Mesci_56575850559..5850957 [-], 399helix-turn-helix domain-containing protein
160Mesci_56585851434..5851538 [-], 105hypothetical protein
161Mesci_56595851569..5851736 [+], 168hypothetical protein
162Mesci_56615853258..5853962 [-], 705DSBA oxidoreductase
163Mesci_56625854717..5854914 [+], 198hypothetical protein
164Mesci_56655857873..5859348 [+], 1476succinate-semialdehyde dehydrogenase
165Mesci_56665859852..5860616 [+], 765HAD-superfamily hydrolase
166Mesci_56675861621..5862241 [-], 621hypothetical protein
167Mesci_56705863764..5864444 [+], 681hypothetical protein
168Mesci_56715864670..5866991 [+], 2322peptidase S9B dipeptidylpeptidase IV domain-containing protein
169Mesci_56725868842..5870971 [+], 2130prolyl oligopeptidase
170Mesci_56745872635..5872853 [-], 219helix-turn-helix domain-containing protein
171Mesci_56755872964..5873230 [+], 267hypothetical protein
172Mesci_56765873729..5874466 [-], 738autoinducer-binding domain-containing protein
173Mesci_56775875126..5876532 [-], 1407class III aminotransferase
174Mesci_56785876736..5876948 [+], 213hypothetical protein
175Mesci_56805877568..5879022 [-], 1455UBA/THIF-type NAD/FAD binding protein
176Mesci_56815879019..5879441 [-], 423hypothetical protein
177Mesci_56835879884..5880381 [-], 498transcriptional regulator AsnC-type-like protein
178Mesci_56845880453..5882006 [-], 1554Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
179Mesci_56855882003..5883436 [-], 1434aldehyde dehydrogenase
180Mesci_56865883629..5884555 [-], 927LysR family transcriptional regulator
181Mesci_56885885290..5886189 [-], 900citryl-CoA lyase
182Mesci_56895886324..5887493 [-], 1170L-carnitine dehydratase/bile acid-inducible protein F
183Mesci_56905887490..5888743 [-], 1254methylaspartate ammonia-lyase
184Mesci_56925889826..5890260 [+], 435ISBm3 transposase
185Mesci_56945891610..5891795 [-], 186hypothetical protein
186Mesci_56965892741..5893781 [+], 1041transposase IS116/IS110/IS902 family protein
187Mesci_56975894198..5894707 [-], 510hypothetical protein
188Mesci_57005895828..5897024 [-], 1197hypothetical protein
189Mesci_57035898191..5898859 [-], 669hypothetical protein
190Mesci_57045898856..5900256 [-], 1401capsule synthesis protein CapA
191Mesci_57055900504..5901541 [-], 1038oligopeptide/dipeptide ABC transporter ATPase
192Mesci_57065901538..5902545 [-], 1008oligopeptide/dipeptide ABC transporter ATPase
193Mesci_57075902547..5903428 [-], 882binding-protein-dependent transport system inner membrane protein
194Mesci_57085903430..5904371 [-], 942binding-protein-dependent transport system inner membrane protein
195Mesci_57095904371..5905975 [-], 1605family 5 extracellular solute-binding protein
196Mesci_57125907605..5908738 [-], 1134beta-lactamase
197Mesci_57135909459..5909824 [+], 366hypothetical protein
198Mesci_57155911082..5912242 [-], 1161transposase IS116/IS110/IS902 family protein
199Mesci_57165912534..5913532 [-], 999succinylglutamate desuccinylase/aspartoacylase
200Mesci_57185915377..5916537 [-], 1161peptidase M24
201Mesci_57225917851..5918582 [+], 732hypothetical protein
202Mesci_57235919028..5919864 [+], 837family 3 extracellular solute-binding protein
203Mesci_57245919917..5920891 [+], 975polar amino acid ABC transporter inner membrane subunit
204Mesci_57255921022..5921762 [+], 741ABC transporter
205Mesci_57265922173..5923843 [+], 1671hypothetical protein
206Mesci_57315925949..5927046 [-], 1098hypothetical protein
207Mesci_57325927615..5927848 [+], 234hypothetical protein
208Mesci_57335928919..5930901 [+], 1983hydrolase CocE/NonD family protein
209Mesci_57355931814..5933244 [-], 1431amidase
210Mesci_57385934889..5936910 [-], 2022oligopeptide/dipeptide ABC transporter ATPase
211Mesci_57395936903..5937754 [-], 852binding-protein-dependent transport system inner membrane protein
212Mesci_57405937754..5938704 [-], 951binding-protein-dependent transport system inner membrane protein
213Mesci_57415938773..5940437 [-], 1665family 5 extracellular solute-binding protein
214Mesci_57425940922..5941269 [+], 348family 3 extracellular solute-binding protein
215Mesci_57455942707..5943297 [-], 591hypothetical protein
216Mesci_57465943447..5944739 [-], 1293class III aminotransferase
217Mesci_57475944732..5947209 [-], 2478FAD dependent oxidoreductase
218Mesci_57485947418..5948161 [-], 744ABC transporter
219Mesci_57495948195..5948956 [-], 762polar amino acid ABC transporter inner membrane subunit
220Mesci_57505948953..5949597 [-], 645polar amino acid ABC transporter inner membrane subunit
221Mesci_57515949708..5950562 [-], 855family 3 extracellular solute-binding protein
222Mesci_57525950782..5952125 [-], 1344MmgE/PrpD family protein
223Mesci_57535952373..5953278 [+], 906sugar isomerase (SIS)
224Mesci_57545953308..5953688 [+], 381carboxymuconolactone decarboxylase
225Mesci_57555953994..5955073 [+], 1080AraC type helix-turn-helix- domain containing protein
226Mesci_57565955070..5955267 [-], 198hypothetical protein
227Mesci_57585957129..5958349 [+], 1221ATP-dependent carboxylate-amine ligase
228Mesci_57605958876..5959982 [-], 1107alcohol dehydrogenase zinc-binding domain-containing protein
229Mesci_57615959999..5961105 [-], 1107mandelate racemase/muconate lactonizing protein
230Mesci_57625961122..5961481 [-], 360carboxymuconolactone decarboxylase
231Mesci_57635961491..5962945 [-], 1455aldehyde dehydrogenase
232Mesci_57645962938..5964041 [-], 1104Rieske (2Fe-2S) iron-sulfur domain
233Mesci_57655964038..5964403 [-], 366hypothetical protein
234Mesci_57665964400..5965107 [-], 708type 11 methyltransferase
235Mesci_57675965104..5966426 [-], 13236-phosphogluconate dehydrogenase
236Mesci_57685966982..5968004 [-], 1023D-alanine--D-alanine ligase
237Mesci_57715970182..5971468 [-], 1287carbamoyl-phosphate synthase L chain ATP-binding protein
238Mesci_57775975848..5976777 [-], 9302OG-Fe(II) oxygenase
239Mesci_57795976951..5977790 [-], 840hypothetical protein
240Mesci_57805977783..5979039 [-], 12572,4-diaminobutyrate 4-transaminase
241Mesci_57855980947..5983628 [-], 2682aminoglycoside 3-N-acetyltransferase
242Mesci_57895988139..5989047 [-], 909transposase IS116/IS110/IS902 family protein
243Mesci_57935991769..5991951 [+], 183hypothetical protein
244Mesci_57945992739..5994589 [+], 1851hydrolase CocE/NonD family protein
245Mesci_57975996831..5997172 [-], 342transposase IS3/IS911 family protein
246Mesci_57995997589..5998335 [-], 747autoinducer-binding domain-containing protein
247Mesci_58015998755..5999768 [-], 10141-aminocyclopropane-1-carboxylate deaminase
248Mesci_58026000371..6000682 [-], 312ferredoxin III
249Mesci_58036000679..6000882 [-], 204hypothetical protein
250Mesci_58056001662..6002837 [-], 1176redoxin
251Mesci_58076003432..6004736 [-], 1305L-lysine 6-monooxygenase
252Mesci_58086007217..6009184 [+], 1968acyltransferase
253Mesci_58096009700..6010584 [-], 885UspA domain-containing protein
254Mesci_58106010685..6011503 [-], 819transcriptional regulator domain-containing protein
255Mesci_58116011496..6011975 [-], 480nitrogen fixation protein
256Mesci_58126011990..6012472 [-], 483nitrogen fixation protein NifX
257Mesci_58136012447..6013829 [-], 1383nitrogenase molybdenum-iron cofactor biosynthesis protein NifN
258Mesci_58146013826..6015325 [-], 1500nitrogenase MoFe cofactor biosynthesis protein NifE
259Mesci_58156015388..6016929 [-], 1542nitrogenase molybdenum-iron protein subunit beta
260Mesci_58166017064..6018566 [-], 1503nitrogenase molybdenum-iron protein subunit alpha
261Mesci_58176018658..6019551 [-], 894nitrogenase iron protein
262Mesci_58186020130..6021350 [+], 1221major facilitator superfamily protein
263Mesci_58206022535..6023239 [+], 705hypothetical protein
264Mesci_58216023229..6023762 [+], 534redoxin
265Mesci_58226023932..6025278 [+], 1347RNA polymerase sigma-54 factor RpoN
266Mesci_58236025291..6025893 [-], 603NifQ family protein
267Mesci_58256026327..6027379 [-], 1053luciferase-like protein
268Mesci_58266027643..6029244 [-], 1602short-chain dehydrogenase/reductase SDR
269Mesci_58276029614..6030480 [-], 867hypothetical protein
270Mesci_58286030483..6031739 [-], 1257cytochrome P450
271Mesci_58306032557..6032919 [-], 363hemin binding protein
272Mesci_58316032930..6033991 [-], 1062hemin-degrading family protein
273Mesci_58326034310..6034630 [+], 321iron-sulfur cluster assembly accessory protein
274Mesci_58336034808..6036025 [+], 1218cysteine desulfurase NifS
275Mesci_58346036022..6037086 [+], 1065pyruvate carboxyltransferase
276Mesci_58356037086..6037466 [+], 381nitrogen fixation protein NifW
277Mesci_58366037648..6038496 [+], 849electron transfer flavoprotein alpha/beta-subunit
278Mesci_58376038515..6039624 [+], 1110electron transfer flavoprotein alpha/beta-subunit
279Mesci_58386039636..6040943 [+], 1308electron-transferring-flavoprotein dehydrogenase
280Mesci_58396040956..6041255 [+], 300ferredoxin-like protein FixX
281Mesci_58406042016..6043497 [+], 1482nitrogenase cofactor biosynthesis protein NifB
282Mesci_58416043529..6043723 [+], 195ferredoxin
283Mesci_58426043800..6044117 [+], 318NifZ family protein
284Mesci_58436044117..6044329 [+], 213nitrogen fixation protein FixT
285Mesci_58446044369..6045253 [+], 885hypothetical protein
286Mesci_58456045340..6047202 [+], 1863ABC transporter
287Mesci_58466047202..6049100 [+], 1899ABC transporter
288Mesci_58476049841..6050566 [+], 726hypothetical protein
289Mesci_58486050719..6050919 [+], 201hypothetical protein
290Mesci_58496050916..6051437 [+], 522hypothetical protein
291Mesci_58506051484..6051579 [+], 96hypothetical protein
292Mesci_58516051973..6053742 [-], 1770Nif-specific regulatory protein
293Mesci_58526054973..6056331 [+], 1359sodium:dicarboxylate symporter
294Mesci_58536056561..6057682 [+], 1122LacI family transcriptional regulator
295Mesci_58546057845..6058684 [+], 840xylose isomerase domain-containing protein
296Mesci_58556058699..6059616 [-], 918LysR family transcriptional regulator
297Mesci_58566059775..6060365 [+], 591nodulation protein A NodA
298Mesci_58576060577..6060858 [+], 282phosphopantetheine-binding protein
299Mesci_58586060859..6062067 [+], 1209beta-ketoacyl synthase
300Mesci_58596062314..6063051 [+], 7383-oxoacyl-(acyl-carrier-protein) reductase
301Mesci_58606063142..6063741 [-], 600hypothetical protein
302Mesci_58616063778..6064761 [-], 984LysR family transcriptional regulator
303Mesci_58626065060..6065650 [+], 591nodulation protein A NodA
304Mesci_58636065647..6066288 [+], 642polysaccharide deacetylase
305Mesci_58646066303..6067655 [+], 1353hyaluronan synthase
306Mesci_58656067882..6068796 [+], 915nodulation ABC transporter NodI
307Mesci_58666068800..6069588 [+], 789ABC transporter NodJ family
308Mesci_58676070188..6070451 [-], 264hypothetical protein
309Mesci_58686070853..6072898 [+], 2046carbamoyltransferase
310Mesci_58696074132..6074599 [+], 468transposase IS3/IS911 family protein
311Mesci_58706074836..6075678 [-], 843xylose isomerase domain-containing protein
312Mesci_58726076243..6076863 [-], 621negative transcriptional regulator
313Mesci_58736077332..6078051 [-], 720B3/4 domain-containing protein
314Mesci_58746078270..6079775 [-], 1506class I and II aminotransferase
315Mesci_58776082316..6082507 [+], 192hypothetical protein
316Mesci_58796083517..6083822 [-], 306hypothetical protein
317Mesci_58806083844..6084731 [-], 888IS1 transposase
318Mesci_58816084830..6085123 [+], 294plasmid maintenance system killer protein
319Mesci_58826085123..6086256 [+], 1134addiction module antidote protein
320Mesci_58836086260..6086721 [+], 462hypothetical protein
321Mesci_58846086944..6087129 [-], 186hypothetical protein
322Mesci_58856087838..6088551 [-], 714GntR family transcriptional regulator
323Mesci_58866088664..6088762 [+], 99hypothetical protein
324Mesci_58896091218..6091790 [+], 573hypothetical protein
325Mesci_58916093049..6093270 [-], 222hypothetical protein
326Mesci_58946094665..6096344 [+], 1680carbamoyltransferase
327Mesci_58956097231..6098193 [-], 963hypothetical protein
328Mesci_58966098689..6099786 [+], 1098hypothetical protein
329Mesci_58976099838..6102261 [+], 2424hypothetical protein
330Mesci_58986102271..6103350 [+], 1080hypothetical protein
331Mesci_58996103529..6106540 [-], 3012peptidase C14 caspase catalytic subunit p20
332Mesci_59006106543..6106716 [-], 174hypothetical protein
333Mesci_59016107920..6108297 [-], 378hypothetical protein
334Mesci_59046112010..6112732 [+], 723hypothetical protein
335Mesci_59056112987..6113430 [+], 444N-acetyltransferase GCN5
336Mesci_59066114210..6114680 [+], 471alanine racemase domain-containing protein
337Mesci_59076114872..6115168 [+], 297chaperonin Cpn10
338Mesci_59086115231..6116898 [+], 1668chaperonin GroEL
339Mesci_59106117493..6122694 [-], 5202shikimate kinase
340Mesci_59116122973..6123293 [-], 321thioredoxin
341Mesci_59126124196..6124402 [+], 207hypothetical protein
342Mesci_59156126274..6126648 [+], 375hypothetical protein
343Mesci_59176127028..6128077 [+], 1050fimbrial assembly family protein
344Mesci_59186128080..6128679 [+], 600general secretion pathway protein M
345Mesci_59196128676..6129242 [+], 567hypothetical protein
346Mesci_59206129239..6130159 [+], 921hypothetical protein
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences1Fasta
Proteins338Fasta
(1) Haskett TL; Ramsay JP; Bekuma AA; Sullivan JT; O'Hara GW; Terpolilli JJ (2017). Evolutionary persistence of tripartite integrative and conjugative elements. Plasmid. 92:30-36. [PubMed:28669811]
(2) Haskett TL; Terpolilli JJ; Bekuma A; O'Hara GW; Sullivan JT; Wang P; Ronson CW; Ramsay JP (2016). Assembly and transfer of tripartite integrative and conjugative genetic elements. Proc Natl Acad Sci U S A. 113(43):12268-12273. [PubMed:27733511]
(3) Reeve W; Nandasena K; Yates R; Tiwari R; O'Hara G; Ninawi M; Gu W; Goodwin L; Detter C; Tapia R; Han C; Copeland A; Liolios K; Chen A; Markowitz V; Pati A; Mavromatis K; Woyke T; Kyrpides N; Ivanova N; Howieson J (2013). Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)). Stand Genomic Sci. 9(2):410-9. [PubMed:24976896]
(4) Reeve W; Nandasena K; Yates R; Tiwari R; O'Hara G; Ninawi M; Chertkov O; Goodwin L; Bruce D; Detter C; Tapia R; Han S; Woyke T; Pitluck S; Nolan M; Land M; Copeland A; Liolios K; Pati A; Mavromatis K; Markowitz V; Kyrpides N; Ivanova N; Goodwin L; Meenakshi U; Howieson J (2013). Complete genome sequence of Mesorhizobium opportunistum type strain WSM2075(T.). Stand Genomic Sci. 9(2):294-303. [PubMed:24976886] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU