 ICEberg ID | 109 |
Name  | R997  |
| ICEO ID | ICEO_0000597 |
| Organism | Proteus mirabilis |
| Size (bp) | ~85 kb |
| GC content [Genome] (%) | - |
| Insertion site | prfC |
| Function | Resistance to ampicillin, streptomycin and sulfonamide |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | AJ579927; AJ579926; AJ579928; AJ579930; AJ580009; EF434299; EF434292; AM412759 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of R997 components from AJ580009 | |||||
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| Incomplete gene list of R997 from AJ580009 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | setR | 1..269 [+], 269 | putative transcriptional regulator | ||
The graph information of R997 components from AJ579930 | |||||
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| Incomplete gene list of R997 from AJ579930 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 56..265 [+], 210 | putative conjugative transfer protein | ||
The graph information of R997 components from AJ579928 | |||||
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| Incomplete gene list of R997 from AJ579928 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | - | 1..608 [+], 608 | putative transfer protein | TraD_F, T4SS component | |
The graph information of R997 components from AJ579927 | |||||
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| Incomplete gene list of R997 from AJ579927 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | int | 1..1106 [+], 1106 | putative integrase | Integrase | |
The graph information of R997 components from AM412759 | |||||
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| Incomplete gene list of R997 from AM412759 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | jef | 1..201 [+], 201 | putative excisionase | ||
The graph information of R997 components from EF434299 | |||||
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| Incomplete gene list of R997 from EF434299 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | eexS2 | 1..432 [+], 432 | EexS2 | ||
The graph information of R997 components from EF434292 | |||||
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| Incomplete gene list of R997 from EF434292 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | traG | 1..144 [+], 144 | TraG | TraG_F, T4SS component | |
 Gene may play role in conjugative transfer |
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(1) Daccord A; Mursell M; Poulin-Laprade D; Burrus V (2012). Dynamics of the SetCD-Regulated Integration and Excision of Genomic Islands Mobilized by Integrating Conjugative Elements of the SXT/R391 Family. J Bacteriol. 194(21):5794-802. [PubMed:22923590]
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(2) Marrero J; Waldor MK (2007). The SXT/R391 family of integrative conjugative elements is composed of two exclusion groups. J Bacteriol. 189(8):3302-5. [PubMed:17307849]
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(3) McGrath BM; O'Halloran JA; Pembroke JT (2005). Pre-exposure to UV irradiation increases the transfer frequency of the IncJ conjugative transposon-like elements R391, R392, R705, R706, R997 and pMERPH and is recA+ dependent. FEMS Microbiol Lett. 243(2):461-5. [PubMed:15686850]
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(4) McGrath BM; Pembroke JT (2004). Detailed analysis of the insertion site of the mobile elements R997, pMERPH, R392, R705 and R391 in E. coli K12. FEMS Microbiol Lett. 237(1):19-26. [PubMed:15268933]
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(5) Boltner D; Osborn AM (2004). Structural comparison of the integrative and conjugative elements R391, pMERPH, R997, and SXT. Plasmid. 51(1):12-23. [PubMed:14711525]
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(6) Murphy DB; Pembroke JT (1999). Monitoring of chromosomal insertions of the IncJ elements R391 and R997 in Escherichia coli K-12. FEMS Microbiol Lett. 174(2):355-61. [PubMed:10339829]
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(7) Matthew M; Hedges RW; Smith JT (1979). Types of beta-lactamase determined by plasmids in gram-negative bacteria. J Bacteriol. 138(3):657-62. [PubMed:378931]
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| experimental literature |