ICEberg
I. Information of ICE
ICEberg ID1079
Name LpcGI-2 This ICE is derived from experimental literature
ICEO ID ICEO_0000185
OrganismLegionella pneumophila Corby
Size (bp)64401
GC content [Genome] (%)39
Insertion sitetRNAMet
Function-
Species that ICE can be transferred toLegionella pneumophila JR32
Nucleotide SequenceCP000675 (complete ICE sequence in this genome)
Replicon-
Genome coordinates2781725..2846914 
Putative oriT region -
Putative relaxase -


II. ICE interaction with IME/CIME/

The interaction information of LpcGI-2 is not available.



The graph information of LpcGI-2 components from CP000675
Complete gene list of LpcGI-2 from CP000675
#Gene Coordinates [+/-], size (bp) Product 
(GenBank annotation)		 *Reannotation 
1rpsU2776888..2777127 [+], 24030S ribosomal protein S21
2lporfX2777330..2777773 [+], 444conserved hypothetical protein
3dnaG2777782..2779515 [+], 1734DNA primase DnaG
4LPC_18302779490..2779615 [+], 126hypothetical protein
5rpoD2779608..2781467 [+], 1860RNA polymerase sigma 70 factor (RpoD)
6LPC_18332781725..2782849 [-], 1125hypothetical protein
7LPC_18342783339..2783809 [-], 471hypothetical protein
8LPC_18352783826..2785100 [-], 1275proline/betaine transport protein like protein
9LPC_18362785078..2785590 [-], 513hypothetical protein
10LPC_18372785632..2786315 [+], 684lipolytic enzyme
11LPC_18382786342..2787145 [+], 804transcription regulator protein, response regulator containing CheY-like receiver domain and HTH DNA-binding domain
12LPC_18392787229..2787468 [+], 240hypothetical protein
13LPC_18402787593..2787790 [+], 198hypothetical protein
14LPC_18412787819..2788214 [+], 396hypothetical protein
15LPC_18422788229..2788714 [-], 486hypothetical protein
16LPC_18432788704..2790137 [-], 1434cadmium efflux ATPase
17LPC_18442790519..2790665 [-], 147hypothetical protein
18LPC_18452790707..2790877 [-], 171hypothetical protein
19cadA2791141..2793276 [-], 2136cadmium translocating P-type ATPase CadA
20helA2793353..2796502 [-], 3150cobalt/zinc/cadmium efflux RND transporter, permease protein HelA
21helB2796512..2797768 [-], 1257cation efflux system HelB
22helC2797765..2799009 [-], 1245cobalt/zinc/cadmium efflux RND transporter, outer membrane protein
23LPC_18502799252..2800616 [-], 1365reverse transcriptase
24LPC_18512801200..2801361 [+], 162hypothetical protein
25LPC_18522801561..2802310 [+], 750hypothetical protein
26LPC_18532802322..2803845 [+], 1524hypothetical protein
27LPC_18542803977..2804285 [+], 309hypothetical protein
28LPC_18552804625..2805824 [+], 1200hypothetical protein
29LPC_18562805843..2807303 [+], 1461transposase IS4
30LPC_18572807505..2808167 [-], 663phage repressor
31lvrA2808352..2809224 [+], 873Legionella vir region protein
32lvrB2809190..2809552 [+], 363Legionella vir region protein
33lvrC2809572..2809769 [+], 198Legionella vir region protein
34LPC_18612809766..2810200 [+], 435putative exported protein
35LPC_18622810197..2810805 [+], 609hypothetical protein
36LPC_18632810798..2811634 [+], 837putative exported protein
37LPC_18642811636..2812094 [+], 459hypothetical protein
38LPC_18652812085..2812783 [+], 699hypothetical protein
39LPC_18662812793..2813116 [+], 324hypothetical protein
40LPC_18672813119..2813382 [+], 264hypothetical protein
41LPC_18682813385..2813771 [+], 387hypothetical protein
42LPC_18692813780..2814130 [+], 351hypothetical protein
43LPC_18702814135..2814797 [+], 663hypothetical protein
44LPC_18712814784..2815566 [+], 783hypothetical protein
45LPC_18722815563..2816876 [+], 1314exported membrane protein
46LPC_18732816833..2817222 [+], 390hypothetical protein
47LPC_18742817233..2820007 [+], 2775Type IV secretory protein VirB4 component
48LPC_18752819997..2820977 [+], 981hypothetical protein
49LPC_18762820987..2822369 [+], 1383membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT
50LPC_18772822371..2823939 [+], 1569membrane protein
51LPC_18782823942..2824151 [-], 210hypothetical protein
52LPC_18792824165..2824497 [+], 333hypothetical protein
53LPC_18802824501..2826507 [+], 2007conjugative coupling factor TraD
54LPC_18812826509..2826991 [+], 483hypothetical protein
55LPC_18822827080..2827289 [-], 210hypothetical protein
56LPC_18832827974..2828777 [+], 804hypothetical protein
57LPC_18842828770..2829669 [+], 900hypothetical protein
58LPC_18852830005..2830265 [+], 261hypothetical protein
59LPC_18862830328..2830834 [+], 507antirestriction protein
60LPC_18872830860..2831783 [-], 924hypothetical protein
61LPC_18882831773..2832225 [-], 453hypothetical protein
62LPC_21362832576..2833751 [-], 1176TnpA transposase
63LPC_21352833804..2834079 [-], 276hypothetical protein
64LPC_21342834083..2834313 [-], 231hypothetical protein
65LPC_21332834410..2834607 [+], 198hypothetical protein
66traK2834793..2835074 [-], 282TraK
67LPC_21312835440..2836138 [+], 699hypothetical protein
68LPC_21302836309..2837241 [-], 933hypothetical protein
69LPC_21292837561..2838199 [-], 639hypothetical protein
70LPC_21282838762..2840456 [-], 1695hypothetical protein
71LPC_21272840523..2841698 [-], 1176transposase (IS652)
72LPC_21262841815..2842585 [+], 771hypothetical protein
73LPC_21252842991..2843518 [-], 528hypothetical protein
74LPC_21242843509..2844492 [-], 984hypothetical protein
75LPC_21232844650..2845018 [-], 369Putative prophage CP4-6 integrase
76LPC_21222845058..2845963 [-], 906transcriptional regulator, LysR family
77LPC_21212846054..2846914 [+], 861hypothetical protein
78LPC_21202847264..2847527 [-], 264hypothetical protein
79LPC_21192847574..2847885 [-], 312mannose-6-phosphate isomerase
80LPC_21182847901..2848158 [-], 258hypothetical protein
81LPC_21172848334..2848807 [+], 474hypothetical protein
82LPC_21162848997..2849914 [+], 918transcriptional regulator, LysR family
 
flank Flanking regions

ElementNo. of sequencesDownload
Nucleotide sequences0Fasta
Proteins0Fasta
(1) Lautner M; Schunder E; Herrmann V; Heuner K (2013). Regulation, integrase-dependent excision, and horizontal transfer of genomic islands in Legionella pneumophila. J Bacteriol. 195(7):1583-97. [PubMed:23354744] experimental in_silico
 
experimental experimental literature
in_silico in silico analysis literature

Genomics & Bioinformatics Group in MML, SJTU