 ICEberg ID | 1034 |
Name  | ICEPspSpa1  |
| ICEO ID | ICEO_0000604 |
| Organism | Pseudoalteromonas sp. BSi20311 |
| Size (bp) | - |
| GC content [Genome] (%) | - |
| Insertion site | - |
| Function | - |
| Species that ICE can be transferred to | - |
| Nucleotide Sequence | HG794402; HG79440; HG794404; HG794405; HG794401 (partial ICE sequence) |
| Putative oriT region | - |
| Putative relaxase | - |
The graph information of ICEPspSpa1 components from HG794402 | |||||
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| Incomplete gene list of ICEPspSpa1 from HG794402 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | enispa1-1 | 194..820 [+], 627 | hypothetical protein | ||
| 2 | enispa1-2 | 1032..1931 [+], 900 | putative Zn peptidase | ||
The graph information of ICEPspSpa1 components from HG794403 | |||||
 | |||||
| Incomplete gene list of ICEPspSpa1 from HG794403 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | mosA | 412..1245 [+], 834 | putative MosA antitoxin component | ||
| 2 | mosT | 1238..2176 [+], 939 | putative MosT toxin component | ||
The graph information of ICEPspSpa1 components from HG794404 | |||||
 | |||||
| Incomplete gene list of ICEPspSpa1 from HG794404 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | vflind-2 | 3787..4470 [-], 684 | putative deoxyribonuclease I | ||
The graph information of ICEPspSpa1 components from HG794405 | |||||
 | |||||
| Incomplete gene list of ICEPspSpa1 from HG794405 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | pspspa1-9 | 666..1520 [-], 855 | hypothetical protein | ||
| 2 | pspspa1-10 | 1530..1874 [-], 345 | putative XRE family transcriptional regulator | ||
| 3 | pspspa1-11 | 2554..3585 [+], 1032 | hypothetical protein | ||
| 4 | pspspa1-12 | 3707..5314 [+], 1608 | putative thiamine biosynthesis protein ThiF | ||
| 5 | pspspa1-13 | 5286..5783 [+], 498 | hypothetical protein | ||
| 6 | pspspa1-14 | 5776..7338 [+], 1563 | hypothetical protein | ||
The graph information of ICEPspSpa1 components from HG794401 | |||||
 | |||||
| Incomplete gene list of ICEPspSpa1 from HG794401 | |||||
| # | Gene | Coordinates [+/-], size (bp) | Product (GenBank annotation) | *Reannotation | |
| 1 | pspspa1-1 | 1922..3679 [+], 1758 | hypothetical protein | ||
| 2 | pspspa1-2 | 3669..5018 [+], 1350 | hypothetical protein | ||
| 3 | pspspa1-3 | 5011..6219 [+], 1209 | hypothetical protein | ||
| 4 | pspspa1-4 | 6229..9411 [+], 3183 | putative DEAD/DEAH box helicase | ||
| 5 | pspspa1-5 | 9427..11625 [+], 2199 | putative GTPase subunit of restriction endonuclease | ||
| 6 | pspspa1-6 | 11625..12752 [+], 1128 | putative McrBC 5-methylcytosine restriction system component | ||
| 7 | pspspa1-7 | 12752..13204 [+], 453 | hypothetical protein | ||
| (1) Rodriguez-Blanco A; Lemos ML; Osorio CR (2016). Unveiling the pan-genome of the SXT/R391 family of ICEs: molecular characterisation of new variable regions of SXT/R391-like ICEs detected in Pseudoalteromonas sp. and Vibrio scophthalmi. Antonie Van Leeuwenhoek. 109(8):1141-52. [PubMed:27230650] |