ICEberg
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Organism: Streptococcus suis 98HAH33
#IDICE nameICE familyReplicon
1313 in_silico ICESsu98HAH33-1ICESa2603NC_009443
2757 in_silico ICE_SsuHAH33_Tn916--
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs1Fasta-
Proteins17FastaProtein
(1) Huang J; Liang Y; Guo D; Shang K; Ge L; Kashif J; Wang L (2016). Comparative Genomic Analysis of the ICESa2603 Family ICEs and Spread of erm(B)- and tet(O)-Carrying Transferable 89K-Subtype ICEs in Swine and Bovine Isolates in China. Front Microbiol. 7:55. [PudMed:26870017]
(2) Ambroset C; Coluzzi C; Guedon G; Devignes MD; Loux V; Lacroix T; Payot S; Leblond-Bourget N (2015). New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration. Front Microbiol. 1.279861111. [PudMed:26779141] in_silico
(3) Palmieri C; Varaldo PE; Facinelli B (2011). Streptococcus suis, an Emerging Drug-Resistant Animal and Human Pathogen. Front Microbiol. 0.246527778. [PudMed:22275909]
(4) Chen C; Tang J; Dong W; Wang C; Feng Y; Wang J; Zheng F; Pan X; Liu D; Li M; Song Y; Zhu X; Sun H; Feng T; Guo Z; Ju A; Ge J; Dong Y; Sun W; Jiang Y; Wang J; Yan J; Yang H; Wang X; Gao GF; Yang R; Wang J; Yu J (2007). A glimpse of streptococcal toxic shock syndrome from comparative genomics of S. suis 2 Chinese isolates. PLoS One. 2(3):e315. [PudMed:17375201]
 
in_silico in silico analysis literature