ICEberg
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Organism: Streptococcus gallolyticus UCN34
#IDICE nameICE familyReplicon
1322 in_silico ICESgal1-NC_013798
2706 in_silico ICE_SgaUCN34_ftsK--
3707 in_silico ICE_SgaUCN34_Tn916--
4894 in_silico ICE_SgaUCN34_TnGBS2--
in_silico Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs1Fasta-
Proteins58FastaProtein
(1) Ambroset C; Coluzzi C; Guedon G; Devignes MD; Loux V; Lacroix T; Payot S; Leblond-Bourget N (2015). New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration. Front Microbiol. 1.279861111. [PudMed:26779141] in_silico
(2) Guerillot R; Da Cunha V; Sauvage E; Bouchier C; Glaser P (2013). Modular evolution of TnGBSs, a new family of integrative and conjugative elements associating insertion sequence transposition, plasmid replication, and conjugation for their spreading. J Bacteriol. 195(9):1979-90. [PudMed:23435978] experimental in_silico
(3) Rusniok C; Couve E; Da Cunha V; El Gana R; Zidane N; Bouchier C; Poyart C; Leclercq R; Trieu-Cuot P; Glaser P (2010). Genome sequence of Streptococcus gallolyticus: insights into its adaptation to the bovine rumen and its ability to cause endocarditis. J Bacteriol. 192(8):2266-76. [PudMed:20139183]
 
experimental experimental literature
in_silico in silico analysis literature