References
Download
Tools
Search
Browse
Home
ICE
IME
CIME
Browse by ICE
|
Browse by Organism
|
Browse by ICE family
ICE list
Genome Map
Download&Alignment
Reference
Organism:
Streptococcus pneumoniae
PN1
#
ID
ICE name
ICE family
Replicon
1
813
ICE
Sp
23FST81 [ICE
Sp
PN1]
-
-
Putative ICEs predicted by bioinformatic methods
The genome map is not available as this strain has not been completely sequenced.
Element
No. of sequences
Download
Alignment
ICEs
1
Fasta
-
Proteins
43
Fasta
Protein
(1) Hilty M; Wuthrich D; Salter SJ; Engel H; Campbell S; Sa-Leao R; de Lencastre H; Hermans P; Sadowy E; Turner P; Chewapreecha C; Diggle M; Pluschke G; McGee L; Koseoglu Eser O; Low DE; Smith-Vaughan H; Endimiani A; Kuffer M; Dupasquier M; Beaudoing E; Weber J; Bruggmann R; Hanage WP; Parkhill J; Hathaway LJ; Muhlemann K; Bentley SD (2014). Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.
Genome Biol Evol
. 6(12):3281-94. [
PudMed:25480686
]
(2) Wyres KL; van Tonder A; Lambertsen LM; Hakenbeck R; Parkhill J; Bentley SD; Brueggemann AB (2013). Evidence of antimicrobial resistance-conferring genetic elements among pneumococci isolated prior to 1974.
BMC Genomics
. 0.930555556. [
PudMed:23879707
]
in silico analysis literature