ICEberg
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Organism: Bacteroides thetaiotaomicron
#IDICE nameICE familyReplicon
13 experimental CTnDOTCTnDOT/ERL-
experimental Data derived from experimental literature
The genome map is not available as this strain has not been completely sequenced.
ElementNo. of sequencesDownloadAlignment
ICEs0Fasta-
Proteins0Fasta-
(1) Park J; Salyers AA (2011). Characterization of the Bacteroides CTnDOT regulatory protein RteC. J Bacteriol. 193(1):91-7. [PudMed:21037014] experimental
(2) Wood MM; Dichiara JM; Yoneji S; Gardner JF (2010). CTnDOT integrase interactions with attachment site DNA and control of directionality of the recombination reaction. J Bacteriol. 192(15):3934-43. [PudMed:20511494] experimental
(3) Laprise J; Yoneji S; Gardner JF (2010). Homology-dependent interactions determine the order of strand exchange by IntDOT recombinase. Nucleic Acids Res. 38(3):958-69. [PudMed:19952068] experimental
(4) Jeters RT; Wang GR; Moon K; Shoemaker NB; Salyers AA (2009). Tetracycline-associated transcriptional regulation of transfer genes of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 191(20):6374-82. [PudMed:19700528] experimental
(5) Malanowska K; Yoneji S; Salyers AA; Gardner JF (2007). CTnDOT integrase performs ordered homology-dependent and homology-independent strand exchanges. Nucleic Acids Res. 35(17):5861-73. [PudMed:17720706] experimental
(6) Moon K; Sonnenburg J; Salyers AA (2007). Unexpected effect of a Bacteroides conjugative transposon, CTnDOT, on chromosomal gene expression in its bacterial host. Mol Microbiol. 64(6):1562-71. [PudMed:17555438] experimental
(7) Dichiara JM; Mattis AN; Gardner JF (2007). IntDOT interactions with core- and arm-type sites of the conjugative transposon CTnDOT. J Bacteriol. 189(7):2692-701. [PudMed:17277054] experimental
(8) Malanowska K; Salyers AA; Gardner JF (2006). Characterization of a conjugative transposon integrase, IntDOT. Mol Microbiol. 60(5):1228-40. [PudMed:16689798] experimental
(9) Moon K; Shoemaker NB; Gardner JF; Salyers AA (2005). Regulation of excision genes of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 187(16):5732-41. [PudMed:16077120] experimental
(10) DiChiara JM; Salyers AA; Gardner JF (2005). In vitro analysis of sequence requirements for the excision reaction of the Bacteroides conjugative transposon, CTnDOT. Mol Microbiol. 56(4):1035-48. [PudMed:15853888] experimental
(11) Wang Y; Rotman ER; Shoemaker NB; Salyers AA (2005). Translational control of tetracycline resistance and conjugation in the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 187(8):2673-80. [PudMed:15805513] experimental
(12) Sutanto Y; DiChiara JM; Shoemaker NB; Gardner JF; Salyers AA (2004). Factors required in vitro for excision of the Bacteroides conjugative transposon, CTnDOT. Plasmid. 52(2):119-30. [PudMed:15336489] experimental
(13) Wang Y; Shoemaker NB; Salyers AA (2004). Regulation of a Bacteroides operon that controls excision and transfer of the conjugative transposon CTnDOT. J Bacteriol. 186(9):2548-57. [PudMed:15090494] experimental
(14) Whittle G; Shoemaker NB; Salyers AA (2002). The role of Bacteroides conjugative transposons in the dissemination of antibiotic resistance genes. Cell Mol Life Sci. 59(12):2044-54. [PudMed:12568330]
(15) Sutanto Y; Shoemaker NB; Gardner JF; Salyers AA (2002). Characterization of Exc, a novel protein required for the excision of Bacteroides conjugative transposon. Mol Microbiol. 46(5):1239-46. [PudMed:12453211] experimental
(16) Cheng Q; Wesslund N; Shoemaker NB; Salyers AA; Gardner JF (2002). Development of an in vitro integration assay for the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 184(17):4829-37. [PudMed:12169608] experimental
(17) Whittle G; Shoemaker NB; Salyers AA (2002). Characterization of genes involved in modulation of conjugal transfer of the Bacteroides conjugative transposon CTnDOT. J Bacteriol. 184(14):3839-47. [PudMed:12081954] experimental
(18) Cheng Q; Sutanto Y; Shoemaker NB; Gardner JF; Salyers AA (2001). Identification of genes required for excision of CTnDOT, a Bacteroides conjugative transposon. Mol Microbiol. 41(3):625-32. [PudMed:11532130] experimental
(19) Whittle G; Hund BD; Shoemaker NB; Salyers AA (2001). Characterization of the 13-kilobase ermF region of the Bacteroides conjugative transposon CTnDOT. Appl Environ Microbiol. 67(8):3488-95. [PudMed:11472924] experimental
(20) Cheng Q; Paszkiet BJ; Shoemaker NB; Gardner JF; Salyers AA (2000). Integration and excision of a Bacteroides conjugative transposon, CTnDOT. J Bacteriol. 182(14):4035-43. [PudMed:10869083] experimental
(21) Li LY; Shoemaker NB; Salyers AA (1995). Location and characteristics of the transfer region of a Bacteroides conjugative transposon and regulation of transfer genes. J Bacteriol. 177(17):4992-9. [PudMed:7665476] experimental
(22) Valentine PJ; Shoemaker NB; Salyers AA (1988). Mobilization of Bacteroides plasmids by Bacteroides conjugal elements. J Bacteriol. 170(3):1319-24. [PudMed:3343220] experimental
(23) Bedzyk LA; Shoemaker NB; Young KE; Salyers AA (1992). Insertion and excision of Bacteroides conjugative chromosomal elements. J Bacteriol. 174(1):166-72. [PudMed:1309516] experimental
 
experimental experimental literature