ICE family: ICEF-III | ||||
We selected ICEF-IIIA1(M64) as a reference and defined ICEF-III family. We classified ICE that has significant sequence alignment and syntenic 'core' structure with ICEF-IIIA1(M64) into this family. | ||||
# | ID | ICE name | Strain | Replicon |
1 | 414 | ICEF-IIIA1(M64) | Mycoplasma fermentans M64 | NC_014921 |
2 | 415 | ICEF-IIIA2(M64) | Mycoplasma fermentans M64 | NC_014921 |
3 | 417 | ICEF-IIIB(M64) | Mycoplasma fermentans M64 | NC_014921 |
Putative ICEs predicted by bioinformatic methods |
Element | No. of sequences | Download | Alignment |
Proteins | 64 | Fasta | Multiple protein sequence alignment by MUSCLE online |
ICEs | 3 | Fasta | Nucleotide sequence comparison by webACT |
(1) Shu HW et al. (2011). Genome Sequence of the Repetitive-Sequence-Rich Mycoplasma fermentans Strain M64. J Bacteriol. 193(16):4302-3. [PudMed:21642450] |