• References
• Download
• Tools
• Search
• Browse
• Home

Browse by Replicon   |    Browse by T4SS Classification   |    Browse by T4SS function   |    Browse by T4SE Classification

#	Replicon	Taxonomy ID	T4SS number	Number of relevant effectors *
1	Orientia tsutsugamushi str. Ikeda chromosome	334380	10	0
2	Bordetella petrii DSM 12804 chromosome	340100	7 [4 ]	0
3	Xanthobacter autotrophicus Py2 chromosome	78245	6	0
4	Acidovorax sp. JS42 chromosome	232721	5	0
5	Legionella pneumophila str. Corby chromosome	400673	5 [2 ]	250 [11 ]
6	Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome	272624	4 [2 ]	296 [170 ]
7	Bradyrhizobium sp. BTAi1 chromosome	288000	4	0
8	Clostridium difficile 630 chromosome	272563	4	0
9	Erythrobacter litoralis HTCC2594 chromosome	314225	4	0
10	Gluconacetobacter diazotrophicus PAl 5 chromosome	272568	4	0
11	Helicobacter pylori P12 chromosome	570508	4 [4 ]	2 [1 ]
12	Legionella pneumophila 2300/99 Alcoy chromosome	423212	4	246 [8 ]
13	Legionella pneumophila str. Paris chromosome	297246	4 [1 ]	258 [29 ]
14	Oligotropha carboxidovorans OM5 chromosome	504832	4	0
15	Parvibaculum lavamentivorans DS-1 chromosome	402881	4	0
16	Parvularcula bermudensis HTCC2503 chromosome	314260	4	0
17	Acidobacterium capsulatum ATCC 51196 chromosome	240015	3	0
18	Acidovorax citrulli AAC00-1 chromosome	397945	3	0
19	Acidovorax ebreus TPSY chromosome	535289	3	0
20	Alicycliphilus denitrificans K601 chromosome	596154	3	0
21	Aromatoleum aromaticum EbN1 chromosome	76114	3	0
22	Bartonella clarridgeiae 73 chromosome	696125	3	9 [1 ]
23	Bartonella grahamii as4aup chromosome	634504	3	7
24	Bartonella tribocorum CIP 105476 chromosome	382640	3 [2 ]	7
25	Burkholderia xenovorans LB400 chromosome 1	266265	3	0
26	Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) chromosome	572265	3	0
27	Caulobacter sp. K31 chromosome	366602	3	0
28	Chelativorans sp. BNC1 chromosome	266779	3	0
29	Cupriavidus metallidurans CH34 chromosome	266264	3	0
30	Delftia acidovorans SPH-1 chromosome	398578	3	0
31	Gluconacetobacter diazotrophicus PAl 5 chromosome	272568	3	0
32	Helicobacter pylori B8 chromosome	693745	3	2
33	Helicobacter pylori G27 chromosome	563041	3 [2 ]	2 [1 ]
34	Helicobacter pylori PeCan4 chromosome	765963	3	2
35	Helicobacter pylori Shi470 chromosome	512562	3 [1 ]	2 [1 ]
36	Legionella longbeachae NSW150 chromosome	661367	3 [1 ]	97
37	Legionella pneumophila str. Lens chromosome	297245	3	235 [11 ]
38	Mesorhizobium opportunistum WSM2075 chromosome	536019	3	0
39	Oligotropha carboxidovorans OM5 chromosome	504832	3	0
40	Serratia proteamaculans 568 chromosome	399741	3	0
41	Sphingobium japonicum UT26S chromosome 1	452662	3	0
42	Staphylococcus aureus subsp. aureus ED98 chromosome	681288	3	0
43	Helicobacter pylori 26695 chromosome	85962	2 [2 ]	2 [1 ]
44	Acidiphilium multivorum AIU301 chromosome	926570	2	0
45	Acidithiobacillus ferrooxidans ATCC 23270 chromosome	243159	2	0
46	Acidithiobacillus ferrooxidans ATCC 53993 chromosome	380394	2	0
47	Azotobacter vinelandii DJ chromosome	322710	2	0
48	Bartonella henselae str. Houston-1 chromosome	283166	2 [2 ]	7 [7 ]
49	Bartonella quintana str. Toulouse chromosome	283165	2 [1 ]	4
50	Dechloromonas aromatica RCB chromosome	159087	2	0
51	Dickeya dadantii Ech586 chromosome	590409	2	0
52	Dickeya zeae Ech1591 chromosome	561229	2	0
53	Enterococcus faecalis V583 chromosome	226185	2	0
54	Escherichia coli ED1a chromosome	585397	2	0
55	gamma proteobacterium HdN1 chromosome	83406	2	0
56	Helicobacter pylori HPAG1 chromosome	357544	2	2 [1 ]
57	Helicobacter pylori J99 chromosome	85963	2 [2 ]	2 [1 ]
58	Helicobacter pylori SJM180 chromosome	765962	2	2
59	Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome	1125630	2	0
60	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 chromosome	484021	2 [1 ]	0
61	Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome	765698	2	0
62	Novosphingobium aromaticivorans DSM 12444 chromosome	279238	2	0
63	Paracoccus denitrificans PD1222 chromosome 1	318586	2	0
64	Pectobacterium atrosepticum SCRI1043 chromosome	218491	2	0
65	Pectobacterium wasabiae WPP163 chromosome	561231	2	0
66	Phenylobacterium zucineum HLK1 chromosome	450851	2	0
67	Proteus mirabilis HI4320 chromosome	529507	2 [1 ]	0
68	Pseudomonas aeruginosa PA7 chromosome	381754	2	0
69	Pseudomonas aeruginosa UCBPP-PA14 chromosome	208963	2 [1 ]	0
70	Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome	96563	2	0
71	Pusillimonas sp. T7-7 chromosome	1007105	2	0
72	Ralstonia pickettii 12J chromosome 1	402626	2	0
73	Rhodopseudomonas palustris BisB18 chromosome	316056	2	0
74	Rhodopseudomonas palustris CGA009 chromosome	258594	2	0
75	Rickettsia bellii OSU 85-389 chromosome	391896	2	0
76	Rickettsia bellii RML369-C chromosome	336407	2	0
77	Rickettsia massiliae MTU5 chromosome	416276	2	0
78	Sphingobium sp. SYK-6 chromosome	627192	2	0
79	Sphingomonas wittichii RW1 chromosome	392499	2	0
80	Sphingopyxis alaskensis RB2256 chromosome	317655	2	0
81	Stenotrophomonas maltophilia K279a chromosome	522373	2	1 [1 ]
82	Streptobacillus moniliformis DSM 12112 chromosome	519441	2	0
83	Streptococcus gallolyticus UCN34 chromosome	637909	2	0
84	Streptococcus suis BM407 chromosome	568814	2	0
85	Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome	396588	2	0
86	Xanthomonas axonopodis pv. citri str. 306 chromosome	190486	2 [1 ]	1 [1 ]
87	Xanthomonas campestris pv. campestris str. 8004 chromosome	314565	2 [1 ]	0
88	Xanthomonas campestris pv. campestris str. B100 chromosome	509169	2	0
89	Xenorhabdus bovienii SS-2004 chromosome	406818	2	0
90	Xenorhabdus nematophila ATCC 19061 chromosome	406817	2	0
91	Coxiella burnetii RSA 493 chromosome	227377	1 [1 ]	127 [97 ]
92	Achromobacter xylosoxidans A8 chromosome	762376	1	0
93	Acidithiobacillus ferrivorans SS3 chromosome	743299	1	0
94	Agrobacterium radiobacter K84 chromosome 1	311403	1	0
95	Alteromonas sp. SN2 chromosome	715451	1	0
96	Anaeromyxobacter dehalogenans 2CP-1 chromosome	455488	1	0
97	Anaplasma centrale str. Israel chromosome	574556	1	0
98	Anaplasma marginale str. Florida chromosome	320483	1	3
99	Anaplasma marginale str. St. Maries chromosome	234826	1 [1 ]	4 [4 ]
100	Anaplasma phagocytophilum HZ chromosome	212042	1 [1 ]	4 [4 ]
101	Azorhizobium caulinodans ORS 571 chromosome	438753	1	0
102	Bacillus atrophaeus 1942 chromosome	720555	1	0
103	Bacillus pumilus SAFR-032 chromosome	315750	1	0
104	Bacillus subtilis subsp. subtilis str. 168 chromosome	224308	1 [1 ]	0
105	Bordetella bronchiseptica RB50 chromosome	257310	1	5
106	Bordetella parapertussis 12822 chromosome	257311	1	4
107	Bordetella pertussis Tohama I chromosome	257313	1 [1 ]	5 [5 ]
108	Bradyrhizobium japonicum USDA 110 chromosome	224911	1	0
109	Brucella abortus bv. 1 str. 9-941 chromosome II	262698	1	8 [1 ]
110	Brucella abortus S19 chromosome 2	430066	1 [1 ]	7
111	Brucella canis ATCC 23365 chromosome II	483179	1 [1 ]	7
112	Brucella melitensis ATCC 23457 chromosome II	546272	1	7
113	Brucella melitensis biovar Abortus 2308 chromosome II	359391	1 [1 ]	15 [15 ]
114	Brucella melitensis bv. 1 str. 16M chromosome II	224914	1 [1 ]	8 [2 ]
115	Brucella microti CCM 4915 chromosome 2	568815	1 [1 ]	7
116	Brucella ovis ATCC 25840 chromosome II	444178	1 [1 ]	7
117	Brucella pinnipedialis B2/94 chromosome 2	520461	1	7
118	Brucella suis 1330 chromosome II	204722	1 [1 ]	8 [1 ]
119	Brucella suis ATCC 23445 chromosome II	470137	1	7
120	Burkholderia ambifaria AMMD chromosome 1	339670	1	0
121	Burkholderia cenocepacia AU 1054 chromosome 2	331271	1	0
122	Burkholderia cenocepacia HI2424 chromosome 2	331272	1	0
123	Burkholderia cenocepacia J2315 chromosome 2	216591	1	0
124	Burkholderia cenocepacia MC0-3 chromosome 2	406425	1	0
125	Burkholderia gladioli BSR3 chromosome 1	999541	1	0
126	Burkholderia multivorans ATCC 17616 chromosome 1	395019	1	0
127	Burkholderia multivorans ATCC 17616 chromosome 1	395019	1	0
128	Burkholderia multivorans ATCC 17616 chromosome 3	395019	1	0
129	Burkholderia multivorans ATCC 17616 chromosome 3	395019	1	0
130	Burkholderia phytofirmans PsJN chromosome 1	398527	1	0
131	Burkholderia phytofirmans PsJN chromosome 2	398527	1	0
132	Burkholderia pseudomallei MSHR346 chromosome I	536230	1	0
133	Burkholderia vietnamiensis G4 chromosome 3	269482	1	0
134	Burkholderia xenovorans LB400 chromosome 3	266265	1	0
135	Campylobacter hominis ATCC BAA-381 chromosome	360107	1	0
136	Campylobacter jejuni subsp. doylei 269.97 chromosome	360109	1	0
137	Candidatus Midichloria mitochondrii IricVA chromosome	696127	1	0
138	Candidatus Protochlamydia amoebophila UWE25 chromosome	264201	1	0
139	Caulobacter crescentus CB15 chromosome	190650	1	0
140	Caulobacter crescentus NA1000 chromosome	565050	1	0
141	Caulobacter segnis ATCC 21756 chromosome	509190	1	0
142	Citrobacter koseri ATCC BAA-895 chromosome	290338	1	0
143	Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome	699246	1	0
144	Clostridium difficile CD196 chromosome	645462	1	0
145	Clostridium difficile R20291 chromosome	645463	1	0
146	Coxiella burnetii CbuG_Q212 chromosome	434923	1 [1 ]	99 [35 ]
147	Coxiella burnetii CbuK_Q154 chromosome	434924	1 [1 ]	99 [37 ]
148	Coxiella burnetii Dugway 5J108-111 chromosome	434922	1 [1 ]	102 [52 ]
149	Coxiella burnetii RSA 331 chromosome	360115	1	80
150	Cupriavidus necator N-1 chromosome 1	1042878	1	0
151	Denitrovibrio acetiphilus DSM 12809 chromosome	522772	1	0
152	Desulfovibrio salexigens DSM 2638 chromosome	526222	1	0
153	Dickeya dadantii 3937 chromosome	198628	1	0
154	Edwardsiella ictaluri 93-146 chromosome	634503	1	0
155	Ehrlichia canis str. Jake chromosome	269484	1	0
156	Ehrlichia chaffeensis str. Arkansas chromosome	205920	1 [1 ]	3 [3 ]
157	Ehrlichia ruminantium str. Gardel chromosome	302409	1	0
158	Ehrlichia ruminantium str. Welgevonden chromosome	254945	1	0
159	Ehrlichia ruminantium str. Welgevonden chromosome	254945	1	0
160	Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome	716541	1	0
161	Erwinia pyrifoliae Ep1/96 chromosome	634499	1	0
162	Escherichia coli UMN026 chromosome	585056	1	0
163	Gallibacterium anatis UMN179 chromosome	1005058	1	0
164	Geobacter lovleyi SZ chromosome	398767	1	0
165	Geobacter sp. M21 chromosome	443144	1	0
166	Haemophilus ducreyi 35000HP chromosome	233412	1	0
167	Haemophilus influenzae 86-028NP chromosome	281310	1	0
168	Haemophilus parainfluenzae T3T1 chromosome	862965	1	0
169	Haemophilus somnus 129PT chromosome	205914	1	0
170	Haemophilus somnus 2336 chromosome	228400	1	0
171	Halomonas elongata DSM 2581 chromosome	768066	1	0
172	Halothiobacillus neapolitanus c2 chromosome	555778	1	0
173	Helicobacter acinonychis str. Sheeba chromosome	382638	1	0
174	Helicobacter pylori B38 chromosome	592205	1	0
175	Herminiimonas arsenicoxydans chromosome	204773	1	0
176	Hirschia baltica ATCC 49814 chromosome	582402	1	0
177	Klebsiella pneumoniae 342 chromosome	507522	1	0
178	Leptothrix cholodnii SP-6 chromosome	395495	1	0
179	Leptotrichia buccalis C-1013-b chromosome	523794	1	0
180	Listeria monocytogenes EGD-e chromosome	169963	1	0
181	Listeria welshimeri serovar 6b str. SLCC5334 chromosome	386043	1	0
182	Mesorhizobium loti MAFF303099 chromosome	266835	1	0
183	Methylibium petroleiphilum PM1 chromosome	420662	1	0
184	Methylobacterium populi BJ001 chromosome	441620	1	0
185	Methylomonas methanica MC09 chromosome	857087	1	0
186	Neisseria gonorrhoeae NCCP11945 chromosome	521006	1	0
187	Neorickettsia risticii str. Illinois chromosome	434131	1 [1 ]	0
188	Neorickettsia sennetsu str. Miyayama chromosome	222891	1	0
189	Nitrosococcus oceani ATCC 19707 chromosome	323261	1	0
190	Nitrosomonas eutropha C91 chromosome	335283	1	0
191	Novosphingobium sp. PP1Y chromosome	702113	1	0
192	Ochrobactrum anthropi ATCC 49188 chromosome 1	439375	1	5
193	Ochrobactrum anthropi ATCC 49188 chromosome 2	439375	1	0
194	Orientia tsutsugamushi str. Boryong chromosome	357244	1	0
195	Paracoccus denitrificans PD1222 chromosome 2	318586	1	0
196	Pelobacter propionicus DSM 2379 chromosome	338966	1	0
197	Photobacterium profundum SS9 chromosome 2	298386	1	0
198	Photorhabdus luminescens subsp. laumondii TTO1 chromosome	243265	1	0
199	Polaromonas naphthalenivorans CJ2 chromosome	365044	1	0
200	Prosthecochloris aestuarii DSM 271 chromosome	290512	1	0
201	Pseudomonas aeruginosa LESB58 chromosome	557722	1	0
202	Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome	994484	1	0
203	Pseudomonas fluorescens Pf0-1 chromosome	205922	1	0
204	Pseudomonas fluorescens Pf-5 chromosome	220664	1	0
205	Pseudomonas fluorescens SBW25 chromosome	216595	1	0
206	Pseudomonas fulva 12-X chromosome	743720	1	0
207	Pseudomonas mendocina NK-01 chromosome	1001585	1	0
208	Pseudomonas putida F1 chromosome	351746	1	0
209	Pseudomonas putida S16 chromosome	1042876	1	0
210	Pseudomonas putida W619 chromosome	390235	1	0
211	Pseudomonas syringae pv. syringae B728a chromosome	205918	1	0
212	Pseudomonas syringae pv. tomato str. DC3000 chromosome	223283	1	0
213	Ralstonia pickettii 12D chromosome 1	428406	1	0
214	Ralstonia solanacearum GMI1000 chromosome	267608	1	0
215	Rhodopseudomonas palustris BisA53 chromosome	316055	1	0
216	Rickettsia africae ESF-5 chromosome	347255	1	0
217	Rickettsia akari str. Hartford chromosome	293614	1	0
218	Rickettsia canadensis str. McKiel chromosome	293613	1	0
219	Rickettsia conorii str. Malish 7 chromosome	272944	1	0
220	Rickettsia felis URRWXCal2 chromosome	315456	1	0
221	Rickettsia heilongjiangensis 054 chromosome	1032845	1	0
222	Rickettsia japonica YH chromosome	652620	1	0
223	Rickettsia peacockii str. Rustic chromosome	562019	1	0
224	Rickettsia prowazekii str. Madrid E chromosome	272947	1	0
225	Rickettsia rickettsii str. Iowa chromosome	452659	1	1 [1 ]
226	Rickettsia rickettsii str. 'Sheila Smith' chromosome	392021	1	1 [1 ]
227	Rickettsia typhi str. Wilmington chromosome	257363	1	1 [1 ]
228	Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 chromosome	882884	1	0
229	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 chromosome	1016998	1	0
230	Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 chromosome	476213	1	0
231	Salmonella enterica subsp. enterica serovar Typhi str. CT18 chromosome	220341	1	0
232	Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome	209261	1	0
233	Serratia plymuthica AS9 chromosome	768492	1	0
234	Serratia sp. AS12 chromosome	768490	1	0
235	Shewanella sp. ANA-3 chromosome 1	94122	1	0
236	Shewanella sp. W3-18-1 chromosome	351745	1 [1 ]	0
237	Staphylococcus aureus subsp. aureus COL chromosome	93062	1	0
238	Staphylococcus aureus subsp. aureus MRSA252 chromosome	282458	1	0
239	Staphylococcus aureus subsp. aureus Mu3 chromosome	418127	1	0
240	Staphylococcus aureus subsp. aureus Mu50 chromosome	158878	1	0
241	Staphylococcus aureus subsp. aureus USA300_FPR3757 chromosome	451515	1	0
242	Staphylococcus aureus subsp. aureus USA300_TCH1516 chromosome	451516	1	0
243	Staphylococcus pseudintermedius HKU10-03 chromosome	937773	1	0
244	Stenotrophomonas maltophilia JV3 chromosome	868597	1	0
245	Stenotrophomonas maltophilia R551-3 chromosome	391008	1	0
246	Streptococcus agalactiae 2603V/R chromosome	208435	1	0
247	Streptococcus agalactiae NEM316 chromosome	211110	1 [1 ]	0
248	Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 chromosome	990317	1	0
249	Streptococcus mitis B6 chromosome	365659	1	0
250	Streptococcus mutans UA159 chromosome	210007	1	0
251	Streptococcus oralis Uo5 chromosome	927666	1	0
252	Streptococcus pasteurianus ATCC 43144 chromosome	981540	1	0
253	Streptococcus pneumoniae 670-6B chromosome	189423	1	0
254	Streptococcus pneumoniae ATCC 700669 chromosome	561276	1	0
255	Streptococcus pneumoniae CGSP14 chromosome	516950	1	0
256	Streptococcus pneumoniae G54 chromosome	512566	1	0
257	Streptococcus pneumoniae Hungary19A-6 chromosome	487214	1	0
258	Streptococcus pneumoniae P1031 chromosome	488223	1	0
259	Streptococcus pneumoniae Taiwan19F-14 chromosome	487213	1	0
260	Streptococcus pneumoniae TCH8431/19A chromosome	525381	1	0
261	Streptococcus pseudopneumoniae IS7493 chromosome	1054460	1	0
262	Streptococcus suis 05ZYH33 chromosome	391295	1 [1 ]	1 [1 ]
263	Streptococcus suis 98HAH33 chromosome	391296	1	0
264	Streptococcus suis SC84 chromosome	568813	1	0
265	Syntrophus aciditrophicus SB chromosome	56780	1	0
266	Taylorella equigenitalis MCE9 chromosome	937774	1	0
267	Thauera sp. MZ1T chromosome	85643	1	0
268	Thiomonas intermedia K12 chromosome	75379	1	0
269	Tolumonas auensis DSM 9187 chromosome	595494	1	0
270	Variovorax paradoxus S110 chromosome 2	543728	1	0
271	Verminephrobacter eiseniae EF01-2 chromosome	391735	1	0
272	Vibrio cholerae MJ-1236 chromosome 1	593588	1	0
273	Vibrio vulnificus CMCP6 chromosome II	216895	1	0
274	Wolbachia endosymbiont of Culex quinquefasciatus Pel chromosome	570417	1	0
275	Wolbachia endosymbiont of Drosophila melanogaster chromosome	163164	1 [1 ]	0
276	Wolbachia endosymbiont strain TRS of Brugia malayi chromosome	292805	1	15 [15 ]
277	Wolbachia sp. wRi chromosome	66084	1 [1 ]	0
278	Wolinella succinogenes DSM 1740 chromosome	273121	1	0
279	Xanthomonas albilineans GPE PC73 chromosome	380358	1	0
280	Xanthomonas campestris pv. campestris str. ATCC 33913 chromosome	190485	1	0
281	Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome	316273	1	0
282	Xylella fastidiosa 9a5c chromosome	160492	1	0
283	Yersinia enterocolitica subsp. enterocolitica 8081 chromosome	393305	1	0
284	Yersinia pestis Z176003 chromosome	637386	1	0
285	Yersinia pseudotuberculosis IP 31758 chromosome	349747	1	0
286	Zymomonas mobilis subsp. mobilis NCIMB 11163 chromosome	622759	1	0
Total	97 , 53 , 228		447 [53 ]	2083 [520 ]
Number of T4SSs that are from experimental literatures
Number of T4Ses that are from experimental literatures
Number of structure of T4SSs components
Number of accessory proteins of T4SSs for substrate-channel docking.
Number of information on host-pathogen interaction.
* Number of effecters that can be delivered by T4SS(s) encoded by the replicon. In some cases, effectors are not encoded by the same replicon that coding for T4SS.