SecReT4

T4SS
References

T4SS ID	792
Strain	Acidithiobacillus ferrooxidans ATCC 23270
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_011761
Location	1406427..1415211; 1466762..1474577
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	0	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	0	1

The information of T4SS components from NC_011761
Region 1: 1406427..1415211

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	AFE_1622	1401941..1402057 [+], 117	218668053	hypothetical protein
2	AFE_1623	1402091..1402267 [+], 177	218667330	hypothetical protein
3	AFE_1624	1402741..1402920 [+], 180	218667813	hypothetical protein
4	AFE_1625	1403110..1403754 [+], 645	218665281	hypothetical protein
5	AFE_1626	1404035..1404139 [+], 105	218667380	hypothetical protein
6	AFE_1627	1404171..1404365 [-], 195	218665462	hypothetical protein
7	AFE_1628	1404393..1404533 [+], 141	218666281	hypothetical protein
8	AFE_1629	1404550..1404741 [+], 192	218666807	hypothetical protein
9	AFE_1631	1405113..1405412 [+], 300	218665941	hypothetical protein
10	AFE_1633	1405521..1405826 [+], 306	218666838	hypothetical protein
11	AFE_1632	1405747..1406259 [-], 513	218667452	hypothetical protein
12	AFE_1634 (trbB)	1406427..1407395 [+], 969	218668066	P-type conjugative transfer protein TrbB	TrbB
13	AFE_1635	1407792..1408583 [-], 792	218666794	hypothetical protein
14	AFE_1636	1408788..1409174 [+], 387	218667853	hypothetical protein	TrbC
15	AFE_1637	1409178..1409555 [+], 378	218665190	conjugal transfer protein TrbD	TrbD
16	AFE_1638	1409555..1412077 [+], 2523	218666854	conjugal transfer protein trbE	TrbE
17	AFE_1639	1412074..1412337 [+], 264	218666369	hypothetical protein
18	AFE_1640	1412420..1413160 [+], 741	218668165	conjugal transfer protein trbJ	TrbJ
19	AFE_1641	1413172..1413426 [+], 255	218665958	lipoprotein
20	AFE_1642	1413442..1415211 [+], 1770	218667889	conjugal transfer protein trbL	TrbL
21	AFE_1643	1415204..1415677 [+], 474	218667574	hypothetical protein
22	AFE_1644	1415851..1416318 [-], 468	218666507	hypothetical protein
23	AFE_1645	1416346..1416552 [-], 207	218665940	hypothetical protein
24	AFE_1646	1416685..1418169 [-], 1485	218667609	serine protease, DO/DeqQ family
25	AFE_1647	1418220..1418483 [-], 264	218665242	hypothetical protein
26	AFE_1648	1418670..1419116 [-], 447	218667995	heat shock protein, Hsp20 family
27	AFE_1650	1419340..1419477 [+], 138	218667349	hypothetical protein
28	AFE_1649	1419451..1420206 [-], 756	218668041	hypothetical protein

Region 2: 1466762..1474577

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	AFE_1690 (cbbS-2)	1462235..1462567 [-], 333	218665037	ribulose bisphosphate carboxylase, small subunit
2	AFE_1691 (rbcL)	1462659..1464080 [-], 1422	218666828	ribulose bisophosphate carboxylase
3	AFE_1692 (cbbR)	1464153..1465151 [+], 999	218665925	rubisco operon transcriptional regulator
4	AFE_1693	1465595..1466452 [+], 858	218666360	hypothetical protein
5	AFE_1694	1466762..1467430 [+], 669	218665075	conjugal transfer protein	TrbF
6	AFE_1695	1467443..1468588 [+], 1146	218666648	conjugal transfer protein	TrbG
7	AFE_1696	1468590..1469591 [+], 1002	218667724	conjugal transfer protein
8	AFE_1698	1471391..1472062 [+], 672	218667588	conjugal transfer -like protein	TrbN
9	AFE_1699	1472073..1474577 [+], 2505	218665095	TraG/TraD family protein	TraG
10	AFE_1700	1474687..1474881 [+], 195	218667519	hypothetical protein
11	AFE_1702	1475207..1475395 [-], 189	218666747	hypothetical protein
12	AFE_1703	1475398..1475625 [-], 228	218666052	hypothetical protein
13	AFE_1704	1475603..1475839 [-], 237	218665339	hypothetical protein
14	AFE_1705	1475927..1476058 [+], 132	218666563	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Valdes J; Pedroso I; Quatrini R; Dodson RJ; Tettelin H; Blake R 2nd; Eisen JA; Holmes DS (2008). Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications. BMC Genomics. 0.789583333. [PudMed:19077236]