SecReT4

T4SS
References

T4SS ID	739
Strain	Alicycliphilus denitrificans K601
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_015422
Location	2009437..2023471; 2055403..2060107
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_015422
Region 1: 2009437..2023471

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Alide2_1902	2004636..2005292 [+], 657	330824493	hypothetical protein
2	Alide2_1903	2005360..2006475 [+], 1116	330824494	hypothetical protein
3	Alide2_1904	2006587..2006892 [+], 306	330824495	hypothetical protein
4	Alide2_1905	2006995..2009277 [+], 2283	330824496	DEAD/DEAH box helicase
5	Alide2_1906	2009437..2010048 [+], 612	330824497	integrating conjugative element protein PilL	Tfc2
6	Alide2_1907	2010045..2010689 [+], 645	330824498	hypothetical protein
7	Alide2_1908	2010699..2011430 [+], 732	330824499	integrating conjugative element protein	Tfc3
8	Alide2_1909	2011415..2012014 [+], 600	330824500	lytic transglycosylase catalytic subunit	Tfc4
9	Alide2_1910	2012011..2012577 [+], 567	330824501	integrating conjugative element protein	Tfc5
10	Alide2_1911	2012598..2014757 [+], 2160	330824502	conjugative coupling factor TraD	Tfc6
11	Alide2_1912	2014754..2015503 [+], 750	330824503	integrating conjugative element membrane protein	Tfc8
12	Alide2_1913	2015617..2016024 [+], 408	330824504	hypothetical protein	Tfc9
13	Alide2_1914	2016021..2016260 [+], 240	330824505	integrating conjugative element protein
14	Alide2_1915	2016282..2016659 [+], 378	330824506	integrating conjugative element membrane protein
15	Alide2_1916	2016672..2017100 [+], 429	330824507	conjugative transfer region protein	Tfc11
16	Alide2_1917	2017097..2017789 [+], 693	330824508	integrating conjugative element protein	Tfc12
17	Alide2_1918	2017786..2018715 [+], 930	330824509	integrating conjugative element protein	Tfc13
18	Alide2_1919	2018705..2020174 [+], 1470	330824510	integrating conjugative element protein	Tfc14
19	Alide2_1920	2020155..2020589 [+], 435	330824511	conjugative transfer region lipoprotein	Tfc15
20	Alide2_1921	2020589..2023471 [+], 2883	330824512	conjugative transfer ATPase	Tfc16
21	Alide2_1922	2023482..2024237 [+], 756	330824513	DSBA oxidoreductase
22	Alide2_1923	2024431..2025018 [+], 588	330824514	hypothetical protein
23	Alide2_1924	2025193..2025801 [+], 609	330824515	TetR family transcriptional regulator
24	Alide2_1925	2025798..2026949 [+], 1152	330824516	RND family efflux transporter MFP subunit
25	Alide2_1926	2026946..2028151 [+], 1206	330824517	hypothetical protein

Region 2: 2055403..2060107

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Alide2_1951	2050561..2050836 [-], 276	330824541	mercuric transport periplasmic protein
2	Alide2_1952	2050850..2051200 [-], 351	330824542	mercuric transport protein MerT
3	Alide2_1953	2051272..2051706 [+], 435	330824543	MerR family transcriptional regulator
4	Alide2_1956	2055403..2055849 [+], 447	330824544	integrating conjugative element protein	Tfc24
5	Alide2_1957	2055846..2056796 [+], 951	330824545	integrating conjugative element protein	Tfc23
6	Alide2_1958	2056807..2058207 [+], 1401	330824546	integrating conjugative element protein	Tfc22
7	Alide2_1959	2058207..2058566 [+], 360	330824547	hypothetical protein
8	Alide2_1960	2058590..2060107 [+], 1518	330824548	hypothetical protein	Tfc19
9	Alide2_1961	2060108..2060479 [-], 372	330824549	hypothetical protein
10	Alide2_1962	2060602..2061066 [-], 465	330824550	hypothetical protein
11	Alide2_1963	2061066..2061383 [-], 318	330824551	AbrB family transcriptional regulator
12	Alide2_1964	2061697..2063562 [+], 1866	330824552	integrating conjugative element relaxase
13	Alide2_1965	2063589..2063894 [-], 306	330824553	helix-turn-helix domain-containing protein
14	Alide2_1966	2064013..2064633 [+], 621	330824554	LysR family transcriptional regulator

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015422