The information of T4SS components from NC_008752 |
| Region 1: 527741..530091 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | AAVE_RS02400 | 523213..524478 [+], 1266 | 500117661 | integrase arm-type DNA-binding domain-containing protein | | |
| 2 | AAVE_RS02405 | 524913..525860 [-], 948 | 500117364 | IS481-like element ISAav5 family transposase | | |
| 3 | AAVE_RS25910 | 525917..526345 [+], 429 | 1822442297 | hypothetical protein | | |
| 4 | AAVE_RS02415 | 526435..526788 [-], 354 | 1450148133 | hypothetical protein | | |
| 5 | AAVE_RS02420 | 526785..527744 [-], 960 | 500117663 | phosphoadenosine phosphosulfate reductase family protein | | |
| 6 | AAVE_RS02425 | 527741..529132 [-], 1392 | 754218445 | integrating conjugative element protein | | |
| 7 | AAVE_RS02430 | 529162..530091 [-], 930 | 500117665 | TIGR03756 family integrating conjugative element protein | Tfc23 | |
| 8 | AAVE_RS02435 | 530091..530513 [-], 423 | 500117666 | TIGR03757 family integrating conjugative element protein | | |
| 9 | AAVE_RS02440 | 530671..531174 [-], 504 | 500117667 | DNA repair protein RadC | | |
| 10 | AAVE_RS02445 | 531453..532388 [-], 936 | 1450148131 | hypothetical protein | | |
| 11 | AAVE_RS02450 | 532566..533504 [-], 939 | 500117669 | tripartite tricarboxylate transporter substrate binding protein | | |
| 12 | AAVE_RS02455 | 533574..534461 [-], 888 | 500117670 | NAD(P)-dependent oxidoreductase | | |
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| Region 2: 545993..554015 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | AAVE_RS02480 | 543696..544019 [+], 324 | 754217784 | hypothetical protein | | |
| 2 | AAVE_RS25260 | 544063..544386 [+], 324 | 1557736634 | hypothetical protein | | |
| 3 | AAVE_RS24200 | 544457..545341 [+], 885 | 500117675 | AP2 domain-containing protein | | |
| 4 | AAVE_RS02485 | 545268..545978 [-], 711 | 500117676 | DsbA family protein | | |
| 5 | AAVE_RS02490 | 545993..548851 [-], 2859 | 754218449 | conjugative transfer ATPase | | |
| 6 | AAVE_RS02495 | 548929..549366 [-], 438 | 754217786 | TIGR03751 family conjugal transfer lipoprotein | | |
| 7 | AAVE_RS02500 | 549374..550849 [-], 1476 | 500117679 | TIGR03752 family integrating conjugative element protein | Tfc14 | |
| 8 | AAVE_RS02505 | 550839..551834 [-], 996 | 500117680 | TIGR03749 family integrating conjugative element protein | Tfc13 | |
| 9 | AAVE_RS02510 | 551831..552532 [-], 702 | 500117681 | TIGR03746 family integrating conjugative element protein | Tfc12 | |
| 10 | AAVE_RS02515 | 552529..552987 [-], 459 | 500117682 | TIGR03750 family conjugal transfer protein | Tfc11 | |
| 11 | AAVE_RS02520 | 552998..553366 [-], 369 | 500117683 | TIGR03745 family integrating conjugative element membrane protein | | |
| 12 | AAVE_RS02525 | 553399..553641 [-], 243 | 500117684 | TIGR03758 family integrating conjugative element protein | | |
| 13 | AAVE_RS02530 | 553638..554015 [-], 378 | 500117685 | hypothetical protein | Tfc9 | |
| 14 | AAVE_RS02535 | 554462..555766 [+], 1305 | 500117686 | hypothetical protein | | |
| 15 | AAVE_RS02540 | 556006..556905 [+], 900 | 500117687 | recombinase family protein | | |
| 16 | AAVE_RS02550 | 556940..558153 [+], 1214 | 1253027058 | IS3-like element ISAav4 family transposase | | |
| 17 | AAVE_RS25265 | 558175..558627 [+], 453 | 500117690 | hypothetical protein | | |
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| Region 3: 569843..575948 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | AAVE_RS24205 | 565622..566430 [-], 809 | 1194615182 | IS5 family transposase | | |
| 2 | AAVE_RS24210 | 566509..567294 [+], 786 | 1450148123 | ATP-binding protein | | |
| 3 | AAVE_RS24215 | 568116..569567 [-], 1452 | 1787104351 | TIR domain-containing protein | | |
| 4 | AAVE_RS02595 | 569843..570592 [-], 750 | 500117698 | TIGR03747 family integrating conjugative element membrane protein | Tfc8 | |
| 5 | AAVE_RS02600 (traD) | 570664..572781 [-], 2118 | pseudogene | type IV conjugative transfer system coupling protein TraD | | |
| 6 | AAVE_RS02605 | 572783..573367 [-], 585 | 500117700 | integrating conjugative element protein | Tfc5 | |
| 7 | AAVE_RS02610 | 573364..573972 [-], 609 | 500117701 | transglycosylase SLT domain-containing protein | Tfc4 | |
| 8 | AAVE_RS02615 | 573957..574715 [-], 759 | 500117702 | TIGR03759 family integrating conjugative element protein | Tfc3 | |
| 9 | AAVE_RS02620 | 574726..575385 [-], 660 | 500117703 | hypothetical protein | | |
| 10 | AAVE_RS02625 | 575379..575948 [-], 570 | 500117704 | PilL N-terminal domain-containing protein | Tfc2 | |
| 11 | AAVE_RS02630 | 576096..577157 [+], 1062 | 500117705 | hypothetical protein | | |
| 12 | AAVE_RS02635 | 577229..578026 [+], 798 | 500117706 | hypothetical protein | | |
| 13 | AAVE_RS02640 | 578158..579669 [+], 1512 | 500117707 | MASE1 domain-containing protein | | |
| 14 | AAVE_RS02645 | 579653..580087 [-], 435 | 754217795 | hypothetical protein | | |
| 15 | AAVE_RS02650 | 580184..580819 [-], 636 | 500117709 | hypothetical protein | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.