T4SS ID	704
Strain	Burkholderia xenovorans LB400
Replicon	chromosome 1 [Browse all T4SS(s) in this replicon]
Accession	NC_007951
Location	3589842..3610530
Name	Tfc
Function	conjugation
Classification	Type IVC; Type G
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	0	0	0	0	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_007951
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Bxe_A1203	3585210..3586319 [+], 1110	91784596	hypothetical protein
2	Bxe_A1202	3586392..3588698 [+], 2307	91784597	plasmid-related, DNA/RNA helicase
3	Bxe_A1201	3588812..3589681 [+], 870	91784598	hypothetical protein
4	Bxe_A1200	3589842..3590441 [+], 600	91784599	hypothetical protein
5	Bxe_A1199	3590438..3591088 [+], 651	91784600	hypothetical protein
6	Bxe_A1198	3591103..3591822 [+], 720	91784601	hypothetical protein
7	Bxe_A1197	3591804..3592394 [+], 591	91784602	hypothetical protein
8	Bxe_A1196	3592391..3592939 [+], 549	91784603	hypothetical protein
9	Bxe_A1195	3592944..3595130 [+], 2187	91784604	hypothetical protein	Tfc6
10	Bxe_A1194	3595127..3595876 [+], 750	91784605	hypothetical protein	Tfc8
11	Bxe_A1193	3595913..3596317 [-], 405	91784606	hypothetical protein
12	Bxe_A1192	3596503..3596886 [+], 384	91784607	hypothetical protein	Tfc9
13	Bxe_A1191	3596883..3597116 [+], 234	91784608	hypothetical protein
14	Bxe_A1190	3597127..3597492 [+], 366	91784609	hypothetical protein
15	Bxe_A1189	3597505..3597915 [+], 411	91784610	hypothetical protein	Tfc11
16	Bxe_A1188	3597912..3598604 [+], 693	91784611	hypothetical protein	Tfc12
17	Bxe_A1187	3598601..3599533 [+], 933	91784612	hypothetical protein	Tfc13
18	Bxe_A1186	3599523..3600941 [+], 1419	91784613	hypothetical protein	Tfc14
19	Bxe_A1185	3600922..3601362 [+], 441	91784614	hypothetical protein	Tfc15
20	Bxe_A1184	3601362..3604229 [+], 2868	91784615	hypothetical protein	Tfc16
21	Bxe_A1183	3604243..3605007 [+], 765	91784616	hypothetical protein
22	Bxe_A1182	3605191..3605685 [+], 495	91784617	DNA repair protein RadC
23	Bxe_A1181	3605844..3606290 [+], 447	91784618	hypothetical protein	Tfc24
24	Bxe_A1180	3606287..3607234 [+], 948	91784619	hypothetical protein	Tfc23
25	Bxe_A1179	3607244..3608641 [+], 1398	91784620	hypothetical protein	Tfc22
26	Bxe_A1178	3608638..3608997 [+], 360	91784621	hypothetical protein
27	Bxe_A1177	3609013..3610530 [+], 1518	91784622	hypothetical protein	Tfc19
28	Bxe_A1176	3610544..3610921 [-], 378	91784623	hypothetical protein
29	Bxe_A1175	3610949..3611407 [-], 459	91784624	hypothetical protein
30	Bxe_A1174	3611407..3611793 [-], 387	91784625	AbrB family transcriptional regulator
31	Bxe_A1173	3612030..3613877 [+], 1848	91784626	hypothetical protein
32	Bxe_A1171	3614392..3615198 [-], 807	91784627	AraC family transcriptional regulator

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICEBxeLB400-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation