SecReT4

T4SS
References

T4SS ID	702
Strain	Nitrosococcus oceani ATCC 19707
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_007484
Location	675757..703311
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_007484

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Noc_0623	671077..672168 [+], 1092	77164147	hypothetical protein
2	Noc_0624	672358..672786 [+], 429	77164148	hypothetical protein
3	Noc_0625	672892..673407 [+], 516	77164149	DNA repair protein RadC
4	Noc_0626	673503..673928 [+], 426	77164150	hypothetical protein
5	Noc_0627	674774..675640 [+], 867	77164151	integrase
6	Noc_0628	675757..676251 [+], 495	77164152	PilL protein	Tfc2
7	Noc_0629	676468..677286 [+], 819	77164153	hypothetical protein	Tfc3
8	Noc_0630	677299..677862 [+], 564	77164154	lytic transglycosylase, catalytic	Tfc4
9	Noc_0631	677870..678430 [+], 561	77164155	hypothetical protein	Tfc5
10	Noc_0632	678442..680568 [+], 2127	77164156	hypothetical protein	Tfc6
11	Noc_0633	680571..681302 [+], 732	77164157	hypothetical protein	Tfc8
12	Noc_0634	681387..681788 [+], 402	77164158	hypothetical protein
13	Noc_0635	681785..682477 [+], 693	77164159	hypothetical protein
14	Noc_0636	682483..683100 [+], 618	77164160	exonuclease
15	Noc_0637	683663..683929 [+], 267	77164161	transposase IS3/IS911
16	Noc_0638	683965..684783 [+], 819	77164162	integrase catalytic subunit
17	Noc_0639	684968..689836 [+], 4869	77164163	hypothetical protein
18	Noc_0640	690133..690435 [+], 303	77164164	hypothetical protein	Tfc9
19	Noc_0641	690445..690675 [+], 231	77164165	hypothetical protein
20	Noc_0642	690776..691153 [+], 378	77164166	hypothetical protein
21	Noc_0643	691192..691572 [+], 381	77164167	hypothetical protein	Tfc11
22	Noc_0644	691544..692221 [+], 678	77164168	hypothetical protein	Tfc12
23	Noc_0645	692218..693042 [+], 825	77164169	hypothetical protein	Tfc13
24	Noc_0646	693062..694483 [+], 1422	77164170	hypothetical protein	Tfc14
25	Noc_0647	694485..694886 [+], 402	77164171	hypothetical protein	Tfc15
26	Noc_0648	694894..697620 [+], 2727	77164172	hypothetical protein	Tfc16
27	Noc_0649	697637..698440 [-], 804	77164173	DNA topoisomerase I
28	Noc_0650	698625..699029 [+], 405	77164174	hypothetical protein	Tfc24
29	Noc_0651	699026..700048 [+], 1023	77164175	hypothetical protein	Tfc23
30	Noc_0652	700045..701385 [+], 1341	77164176	hypothetical protein	Tfc22
31	Noc_0653	701746..703311 [+], 1566	77164177	hypothetical protein	Tfc19
32	Noc_0654	703535..706384 [-], 2850	77164178	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_007484