 T4SS ID | 70 |
| Strain | Sphingomonas sp. A1 plasmid pA1 (NC_007353) |
| Replicon | plasmid pA1 [Browse all T4SS(s) in this replicon] |
| Accession | NC_007353 |
| Location | 11337..13774; 33696..45563 |
| Name | Trb |
| Function | NA |
| Classification | Type IVA; Type P |
 This T4SS is identified in this study. | |
T4SS components |
| Component | TrbB | TrbC | TrbD | TrbE | TrbF | TrbG | TrbH | TrbI | TrbJ |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Component | TrbK | TrbL | TrbN | TraF | TraG | ||||
| Number | 1 | 1 | 1 | 1 | 1 |
The information of T4SS components from NC_007353 | ||||||
| Region 1: 11337..13774 | ||||||
  | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pA1_07 (traD) | 8845..9243 [-], 399 | 73746019 | TraD | ||
| 2 | pA1_08 (traE) | 9262..11322 [-], 2061 | 73746020 | TraE | ||
| 3 | pA1_09 (traF) | 11337..11873 [-], 537 | 73746021 | TraF | TraF | |
| 4 | pA1_10 (traG) | 11870..13774 [-], 1905 | 73746022 | TraG | TraG | |
| 5 | pA1_11 (traI) | 13771..16038 [-], 2268 | 73746023 | TraI | ||
| 6 | pA1_12 (traH) | 14073..14492 [-], 420 | 73746024 | TraH | ||
| 7 | pA1_13 (traJ) | 16073..16444 [-], 372 | 73746025 | TraJ | ||
| 8 | pA1_14 (traK) | 17034..17453 [+], 420 | 73746026 | TraK | ||
| 9 | pA1_15 (traL) | 17453..18178 [+], 726 | 73746027 | TraL | ||
| 10 | pA1_16 (traM) | 18178..18618 [+], 441 | 73746028 | TraM | ||
| Region 2: 33696..45563 | ||||||
 | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pA1_31 (klcA) | 28802..29233 [-], 432 | 89142225 | hypothetical protein | ||
| 2 | pA1_32 (trfA) | 31316..32542 [-], 1227 | 89142226 | TrfA | ||
| 3 | pA1_33 (ssb) | 32590..32928 [-], 339 | 73746041 | Ssb | ||
| 4 | pA1_34 (trbA) | 33091..33396 [+], 306 | 73746042 | TrbA | ||
| 5 | pA1_35 (trbB) | 33696..34661 [+], 966 | 73746043 | TrbB | TrbB | |
| 6 | pA1_36 (trbC) | 34683..35147 [+], 465 | 73746044 | TrbC | TrbC | |
| 7 | pA1_37 (trbD) | 35151..35462 [+], 312 | 73746045 | TrbD | TrbD | |
| 8 | pA1_38 (trbE) | 35459..38017 [+], 2559 | 73746046 | TrbE | TrbE | |
| 9 | pA1_39 (trbF) | 38014..38802 [+], 789 | 73746047 | TrbF | TrbF | |
| 10 | pA1_40 (trbG) | 38799..39713 [+], 915 | 73746048 | TrbG | TrbG | |
| 11 | pA1_41 (trbH) | 39716..40177 [+], 462 | 73746049 | TrbH | TrbH | |
| 12 | pA1_42 (trbI) | 40182..41561 [+], 1380 | 73746050 | TrbI | TrbI | |
| 13 | pA1_43 (trbJ) | 41578..42351 [+], 774 | 73746051 | TrbJ | TrbJ | |
| 14 | pA1_44 (trbK) | 42361..42582 [+], 222 | 73746052 | TrbK | TrbK | |
| 15 | pA1_45 (trbL) | 42594..44330 [+], 1737 | 73746053 | TrbL | TrbL | |
| 16 | pA1_46 (trbM) | 44348..44926 [+], 579 | 73746054 | TrbM | ||
| 17 | pA1_47 (trbN) | 44928..45563 [+], 636 | 73746055 | TrbN | TrbN | |
| 18 | pA1_48 (trbO) | 45593..45862 [+], 270 | 73746056 | TrbO | ||
| 19 | pA1_49 (trbP) | 45859..46557 [+], 699 | 73746057 | TrbP | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| Identified as part of this study from NC_007353 |