SecReT4

T4SS
References

T4SS ID	699
Strain	Pectobacterium atrosepticum SCRI1043
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_004547
Location	623308..644037
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	0	1	1	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	1	0	0	1	1	1

The information of T4SS components from NC_004547

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	ECA_RS02735	619034..620236 [+], 1203	499404700	conjugal transfer protein TraF
2	ECA_RS02740	620312..620752 [+], 441	1293415437	plasmid protein
3	ECA_RS02745	620819..621118 [+], 300	499404702	hypothetical protein
4	ECA_RS02750	621150..621848 [+], 699	1293415340	DUF2786 domain-containing protein
5	ECA_RS02755	621946..622320 [+], 375	499404704	hypothetical protein
6	ECA_RS22375	622423..623298 [+], 876	499404705	hypothetical protein
7	ECA_RS02765	623308..624021 [+], 714	499404706	TIGR03759 family integrating conjugative element protein	Tfc3
8	ECA_RS02770	624021..624608 [+], 588	499404707	lytic transglycosylase domain-containing protein	Tfc4
9	ECA_RS02775	624609..625130 [+], 522	499404708	integrating conjugative element protein	Tfc5
10	ECA_RS02780	625127..625744 [+], 618	499404709	restriction endonuclease
11	ECA_RS02785	625728..626204 [+], 477	746241935	hypothetical protein
12	ECA_RS02790 (traD)	626208..628304 [+], 2097	499404711	type IV conjugative transfer system coupling protein TraD	Tfc6
13	ECA_RS02795	628306..629061 [+], 756	499404712	TIGR03747 family integrating conjugative element membrane protein	Tfc8
14	ECA_RS02800	629084..629278 [+], 195	499404713	hypothetical protein
15	ECA_RS02805	629420..629959 [-], 540	499404714	hypothetical protein
16	ECA_RS02810	630094..630414 [+], 321	499404715	RAQPRD family integrative conjugative element protein	Tfc9
17	ECA_RS02815	630416..630655 [+], 240	499404716	TIGR03758 family integrating conjugative element protein
18	ECA_RS02820	630682..631023 [+], 342	499404717	TIGR03745 family integrating conjugative element membrane protein
19	ECA_RS02825	631033..631395 [+], 363	499404718	TIGR03750 family conjugal transfer protein	Tfc11
20	ECA_RS02830	631392..632048 [+], 657	499404719	TIGR03746 family integrating conjugative element protein	Tfc12
21	ECA_RS02835	632105..632971 [+], 867	917379238	TIGR03749 family integrating conjugative element protein
22	ECA_RS02840	632961..634493 [+], 1533	499404721	TIGR03752 family integrating conjugative element protein	Tfc14
23	ECA_RS02845	634503..634946 [+], 444	746241953	hypothetical protein
24	ECA_RS02850	634939..635349 [+], 411	499404723	TIGR03751 family conjugal transfer lipoprotein	Tfc15
25	ECA_RS02855	635349..638210 [+], 2862	499404724	conjugative transfer ATPase	Tfc16
26	ECA_RS02860	638207..638587 [+], 381	pseudogene	acetyltransferase
27	ECA_RS02865	638755..639189 [-], 435	499404726	hypothetical protein
28	ECA_RS02870	639329..639733 [+], 405	499404727	TIGR03757 family integrating conjugative element protein	Tfc24
29	ECA_RS02875	639726..640700 [+], 975	499404728	TIGR03756 family integrating conjugative element protein	Tfc23
30	ECA_RS02880	640710..642134 [+], 1425	499404729	integrating conjugative element protein	Tfc22
31	ECA_RS02885	642200..642508 [+], 309	1293415438	hypothetical protein
32	ECA_RS02890	642505..644037 [+], 1533	499404731	conjugal transfer protein TraG	Tfc19
33	ECA_RS22380	644070..644459 [-], 390	499404732	hypothetical protein
34	ECA_RS02900	644602..644958 [-], 357	1293415341	type II toxin-antitoxin system PemK/MazF family toxin
35	ECA_RS02905	644958..645260 [-], 303	499404734	AbrB/MazE/SpoVT family DNA-binding domain-containing protein
36	ECA_RS02910	645531..647429 [+], 1899	746241959	SAM-dependent DNA methyltransferase
37	ECA_RS22570	647419..648405 [+], 987	499404736	restriction endonuclease subunit S

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_004547