The information of T4SS components from NC_007005 |
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | PSYR_RS07375 | 1611700..1612392 [-], 693 | 489412826 | SOS response-associated peptidase family protein | | |
| 2 | PSYR_RS07380 | 1612506..1612940 [+], 435 | 489412825 | peptidase S24 | | |
| 3 | PSYR_RS07385 (umuC) | 1612927..1614207 [+], 1281 | 499586222 | translesion error-prone DNA polymerase V subunit UmuC | | |
| 4 | PSYR_RS07390 | 1614431..1614811 [+], 381 | 1402898802 | DUF3742 family protein | | |
| 5 | PSYR_RS07395 | 1614863..1616401 [-], 1539 | 499586223 | conjugal transfer protein TraG | Tfc19 | |
| 6 | PSYR_RS07400 | 1616398..1616772 [-], 375 | 490544625 | hypothetical protein | | |
| 7 | PSYR_RS07405 | 1616775..1618166 [-], 1392 | 1818933412 | integrating conjugative element protein | | |
| 8 | PSYR_RS07410 | 1618163..1619101 [-], 939 | 499586225 | TIGR03756 family integrating conjugative element protein | Tfc23 | |
| 9 | PSYR_RS07415 | 1619098..1619571 [-], 474 | 499586226 | TIGR03757 family integrating conjugative element protein | Tfc24 | |
| 10 | PSYR_RS07420 | 1620093..1620281 [+], 189 | 489520341 | hypothetical protein | | |
| 11 | PSYR_RS07425 | 1620353..1620643 [+], 291 | 499586227 | HEAT repeat domain-containing protein | | |
| 12 | PSYR_RS07430 | 1620732..1620956 [+], 225 | 516296101 | hypothetical protein | | |
| 13 | PSYR_RS07435 | 1621010..1621261 [+], 252 | 516296102 | hypothetical protein | | |
| 14 | PSYR_RS07440 | 1621535..1622950 [-], 1416 | 499586229 | DNA cytosine methyltransferase | | |
| 15 | PSYR_RS07445 | 1623523..1623834 [-], 312 | 499586230 | antibiotic biosynthesis monooxygenase | | |
| 16 | PSYR_RS07450 | 1623981..1624916 [-], 936 | 499586231 | LysR family transcriptional regulator | | |
| 17 | PSYR_RS07455 | 1625205..1626230 [+], 1026 | 1818933499 | gluconolaconase | | |
| 18 | PSYR_RS07460 | 1626243..1627124 [+], 882 | 499586233 | LysR family transcriptional regulator | | |
| 19 | PSYR_RS07465 | 1627181..1627840 [-], 660 | pseudogene | IS66 family transposase | | |
| 20 | PSYR_RS07470 | 1627895..1628221 [+], 327 | pseudogene | transposase | | |
| 21 | PSYR_RS07475 | 1628265..1629257 [+], 993 | 499586234 | serine hydrolase | | |
| 22 | PSYR_RS07480 | 1629396..1630082 [-], 687 | 499586235 | DsbA family protein | | |
| 23 | PSYR_RS07485 | 1630079..1630378 [-], 300 | 499586236 | hypothetical protein | | |
| 24 | PSYR_RS07490 | 1630375..1633383 [-], 3009 | 499586237 | conjugative transfer ATPase | Tfc16 | |
| 25 | PSYR_RS07495 | 1633383..1633838 [-], 456 | 499586238 | TIGR03751 family conjugal transfer lipoprotein | Tfc15 | |
| 26 | PSYR_RS07500 | 1633816..1635300 [-], 1485 | 499586239 | TIGR03752 family integrating conjugative element protein | Tfc14 | |
| 27 | PSYR_RS07505 | 1635290..1636213 [-], 924 | 499586240 | TIGR03749 family integrating conjugative element protein | Tfc13 | |
| 28 | PSYR_RS07510 | 1636210..1636878 [-], 669 | 499586241 | TIGR03746 family integrating conjugative element protein | Tfc12 | |
| 29 | PSYR_RS07515 | 1636875..1637267 [-], 393 | 499586242 | TIGR03750 family conjugal transfer protein | Tfc11 | |
| 30 | PSYR_RS07520 | 1637283..1637651 [-], 369 | 499586243 | TIGR03745 family integrating conjugative element membrane protein | | |
| 31 | PSYR_RS07525 | 1637671..1637910 [-], 240 | 499586244 | TIGR03758 family integrating conjugative element protein | | |
| 32 | PSYR_RS07530 | 1637907..1638269 [-], 363 | 489411534 | RAQPRD family integrative conjugative element protein | Tfc9 | |
| 33 | PSYR_RS07535 | 1638349..1638681 [-], 333 | 489411536 | DUF4177 domain-containing protein | | |
| 34 | PSYR_RS07540 | 1638691..1640154 [-], 1464 | 489411537 | ATP-dependent helicase | | |
| 35 | PSYR_RS07545 | 1640164..1640913 [-], 750 | 489411538 | TIGR03747 family integrating conjugative element membrane protein | Tfc8 | |
| 36 | PSYR_RS07550 (traD) | 1640953..1643112 [-], 2160 | 492586523 | type IV conjugative transfer system coupling protein TraD | Tfc6 | |
| 37 | PSYR_RS07555 | 1643124..1643630 [-], 507 | 499586245 | integrating conjugative element protein | Tfc5 | |
| 38 | PSYR_RS07560 | 1643627..1644184 [-], 558 | 499586246 | transglycosylase SLT domain-containing protein | Tfc4 | |
| 39 | PSYR_RS07565 | 1644169..1644915 [-], 747 | 499586247 | TIGR03759 family integrating conjugative element protein | Tfc3 | |
| 40 | PSYR_RS07570 | 1644924..1645634 [-], 711 | 499586248 | hypothetical protein | | |
| 41 | PSYR_RS07575 | 1646094..1646270 [+], 177 | 1777613267 | hypothetical protein | | |
| 42 | PSYR_RS07580 | 1646320..1647093 [+], 774 | 1818933413 | nucleotidyltransferase domain-containing protein | | |
| 43 | PSYR_RS07585 | 1647096..1647725 [+], 630 | 499586250 | hypothetical protein | | |
| 44 | PSYR_RS07590 | 1647712..1649067 [+], 1356 | 1818933414 | hypothetical protein | | |
| 45 | PSYR_RS07595 | 1649070..1649609 [+], 540 | 499586252 | GNAT family N-acetyltransferase | | |
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T4SS ID
This T4SS is identified in this study.
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.