T4SS ID | 54 |
Strain | Neisseria gonorrhoeae plasmid pEP5289 (NC_014105) |
Replicon | plasmid pEP5289 [Browse all T4SS(s) in this replicon] |
Accession | NC_014105 |
Location | 14512..39279 |
Name | Trb |
Function | Conjugation |
Classification | Type IVA; Type P |
This T4SS has been mentioned in a genome sequencing report. |
T4SS components |
Component | TrbB | TrbC | TrbD | TrbE | TrbF | TrbG | TrbH | TrbI | TrbJ |
Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
Component | TrbK | TrbL | TrbN | TraF | TraG | ||||
Number | 1 | 1 | 1 | 1 | 1 |
The information of T4SS components from NC_014105 | ||||||
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | pEP5289_p11 | 10067..10321 [+], 255 | 295788820 | epsilon_2 antitoxin | ||
2 | pEP5289_p12 | 10318..11526 [+], 1209 | 295788821 | zeta_2 toxin | ||
3 | pEP5289_p13 | 11560..11745 [+], 186 | 295788822 | epsilon_1 antitoxin | ||
4 | pEP5289_p14 | 11752..12957 [+], 1206 | 295788823 | zeta_1 toxin | ||
5 | pEP5289_p15 | 12972..13403 [+], 432 | 295788824 | MarR | ||
6 | pEP5289_p16 | 13455..14009 [+], 555 | 295788825 | Res | ||
7 | pEP5289_p17 | 14119..14451 [-], 333 | 295788826 | VapD | ||
8 | pEP5289_p18 | 14512..15111 [-], 600 | 295788827 | TrbN | TrbN | |
9 | pEP5289_p19 | 15111..15689 [-], 579 | 295788828 | TrbM | ||
10 | pEP5289_p20 | 15676..17304 [-], 1629 | 295788829 | TrbL | TrbL | |
11 | pEP5289_p21 | 17315..17455 [-], 141 | 295788830 | TrbK | TrbK | |
12 | pEP5289_p22 | 17518..18294 [-], 777 | 295788831 | TrbJ | TrbJ | |
13 | pEP5289_p23 | 18307..19746 [-], 1440 | 295788832 | TrbI | TrbI | |
14 | pEP5289_p24 | 19750..20160 [-], 411 | 295788833 | TrbH | TrbH | |
15 | pEP5289_p25 | 20157..21023 [-], 867 | 295788834 | TrbG | TrbG | |
16 | pEP5289_p26 | 21036..21743 [-], 708 | 295788835 | TrbF | TrbF | |
17 | pEP5289_p27 | 21743..24307 [-], 2565 | 295788836 | TrbE | TrbE | |
18 | pEP5289_p28 | 24304..24621 [-], 318 | 295788837 | TrbD | TrbD | |
19 | pEP5289_p29 | 24626..25009 [-], 384 | 295788838 | TrbC | TrbC | |
20 | pEP5289_p30 | 25111..26109 [-], 999 | 295788839 | TrbB | TrbB | |
21 | pEP5289_p31 | 26238..26603 [-], 366 | 295788840 | TrbA | ||
22 | pEP5289_p32 | 26663..27046 [+], 384 | 295788841 | Ssb | ||
23 | pEP5289_p33 | 27050..27928 [+], 879 | 295788842 | TrfA | ||
24 | pEP5289_p34 | 28546..28893 [+], 348 | 295788843 | KorC | ||
25 | pEP5289_p35 | 28974..29219 [+], 246 | 295788844 | KleE | ||
26 | pEP5289_p36 | 29229..29984 [+], 756 | 295788845 | IncC2 | ||
27 | pEP5289_p37 | 29990..30907 [+], 918 | 295788846 | ParB | ||
28 | pEP5289_p38 | 31114..31470 [+], 357 | 295788847 | KfrB | ||
29 | pEP5289_p39 | 31507..32043 [+], 537 | 295788848 | KfrC | ||
30 | pEP5289_p40 | 32100..32582 [-], 483 | 295788849 | TraM | ||
31 | pEP5289_p41 | 32590..33315 [-], 726 | 295788850 | TraL | ||
32 | pEP5289_p42 | 33316..33735 [-], 420 | 295788851 | TraK | ||
33 | pEP5289_p43 | 34067..34444 [+], 378 | 295788852 | TraJ | ||
34 | pEP5289_p44 | 34447..36840 [+], 2394 | 295788853 | TraI | ||
35 | pEP5289_p45 | 36857..38746 [+], 1890 | 295788854 | TraG | TraG | |
36 | pEP5289_p46 | 38767..39279 [+], 513 | 295788855 | TraF | TraF | |
37 | pEP5289_p47 | 39282..41477 [+], 2196 | 295788856 | TraE | ||
38 | pEP5289_p48 | 41499..41663 [+], 165 | 295788857 | TraD | ||
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
Proteins Genes |
(1) Pachulec E; van der Does C (2010). Conjugative plasmids of Neisseria gonorrhoeae. PLoS One. 5(4):e9962. [PudMed:20376355] |