SecReT4
T4SS ID494
StrainWolbachia endosymbiont of Drosophila melanogaster
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_002978
Location4300..10215; 333279..333719; 457401..457775; 639402..639725; 816159..830608; 1058663..1059445; 1118862..1121228; 1230956..1231975
NameVirB
FunctionNA
ClassificationType IVA; Type P
experimental Experimental investigation has been performed on this T4SS.

T4SS components
ComponentVirB1VirB2VirB3VirB4VirB5VirB6VirB7VirB8VirB9
Number061204012
ComponentVirB10VirB11VirD4
Number111

The information of T4SS components from NC_002978
Region 1: 4300..10215
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD0001 (dnaA)153..1535 [+], 138342519921chromosome replication initiator DnaA 
2WD0003 (ribA)3145..4227 [+], 108342519922GTP cyclohydrolase II 
3WD00044300..4980 [+], 68142519923type IV secretion system protein VirB8  VirB8
4WD00054973..5767 [+], 79542519924type IV secretion system protein VirB9  VirB9
5WD00065784..7244 [+], 146142519925type IV secretion system protein VirB10  VirB10
6WD00077246..8238 [+], 99342519926type IV secretion system ATPase VirB11  VirB11
7WD00088269..10215 [+], 194742519927type IV secretion system component VirD4  VirD4
8WD000910337..11185 [+], 84942519928surface antigen Wsp paralog 
9WD001011350..12189 [-], 84042519929HemK family modification methylase 
10WD001212529..12663 [-], 13542519930hypothetical protein 
11WD001312642..12776 [+], 13542519931hypothetical protein 
12WD0014 (rpsL)13302..13676 [+], 3754251993230S ribosomal protein S12 
13WD0015 (rpsG)13682..14161 [+], 4804251993330S ribosomal protein S7 
 
Region 2: 333279..333719
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD0347329248..329376 [+], 12942520227hypothetical protein 
2WD0348 (dnaG)329443..331191 [-], 174942520228DNA primase 
3WD0349331900..332004 [+], 10542520229hypothetical protein 
4WD0350332092..333267 [+], 1176425202303-demethylubiquinone-9 3-methyltransferase 
5WD0351333279..333719 [-], 44142520231hypothetical protein  VirB2
6WD0352 (metG)333859..335496 [+], 163842520232methionyl-tRNA synthetase 
7WD0353335570..336754 [-], 118542520233hypothetical protein 
8WD0354 (dnaB)336842..338293 [-], 145242520234replicative DNA helicase 
 
Region 3: 457401..457775
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD0470452417..453679 [-], 126342520341major facilitator family transporter 
2WD0471453655..454134 [+], 48042520342hypothetical protein 
3WD0472454779..455879 [+], 110142520343ATPase AAA 
4WD0473456427..457425 [+], 99942520344pyruvate dehydrogenase subunit beta 
5WD0474457401..457775 [-], 37542520345hypothetical protein  VirB2
6WD0477 (lepA)458475..460271 [-], 179742520346GTP-binding protein LepA 
7WD0478460347..461741 [-], 139542520347malonyl-CoA decarboxylase 
 
Region 4: 639402..639725
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD0646634725..635105 [+], 38142520496IS5 family transposase OrfA 
2WD0647635216..635557 [+], 34242520497IS5 family transposase OrfB 
3WD0649636774..638294 [-], 152142520498HlyD family secretion protein 
4WD0650 (fabG)638560..639294 [+], 735425204993-oxoacyl-ACP reductase 
5WD0651639402..639725 [+], 32442520500hypothetical protein  VirB2
6WD0652639747..641027 [-], 128142520501M48 family peptidase 
7WD0653641099..641752 [-], 654425205023,4-dihydroxy-2-butanone 4-phosphate synthase 
8WD0654 (greA)641759..642253 [-], 49542520503transcription elongation factor GreA 
9WD0655 (atpA)642263..643804 [-], 154242520504ATP synthase F0F1 subunit alpha 
10WD0656 (atpH)643801..644361 [-], 56142520505ATP synthase F1 subunit delta 
 
Region 5: 816159..830608
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD0847811523..811630 [-], 10842520682hypothetical protein 
2WD0848811575..811712 [+], 13842520683hypothetical protein 
3WD0849 (murD)812445..813974 [+], 153042520684UDP-N-acetylmuramoylalanine--D-glutamate ligase 
4WD0850813981..814571 [+], 59142520685hypothetical protein 
5WD0851814576..814869 [+], 29442520686hypothetical protein 
6WD0852814866..815414 [-], 54942520687methyltransferase 
7WD0853815537..816169 [-], 63342520688hypothetical protein 
8WD0854816159..819887 [-], 372942520689hypothetical protein  VirB6
9WD0855819977..822955 [-], 297942520690hypothetical protein  VirB6
10WD0856822952..825339 [-], 238842520691hypothetical protein  VirB6
11WD0857825349..827904 [-], 255642520692type IV secretion system protein VirB6  VirB6
12WD0858827897..830302 [-], 240642520693type IV secretion system ATPase VirB4  VirB4
13WD0859830312..830608 [-], 29742520694type IV secretion system protein VirB3  VirB3
14WD0860 (lysK)830717..832252 [+], 153642520695lysyl-tRNA synthetase 
15WD0861832872..833033 [+], 16242520696hypothetical protein 
 
Region 6: 1058663..1059445
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD10971053794..1054003 [-], 21042520903hypothetical protein 
2WD1098 (engA)1054135..1055460 [+], 132642520904GTP-binding protein EngA 
3WD10991055457..1055978 [+], 52242520905DsbB family disulfide bond formation protein 
4WD11001055953..1056495 [+], 54342520906Coq7 family protein 
5WD1102 (mraY)1057076..1058056 [+], 98142520907phospho-N-acetylmuramoyl-pentapeptide-transferase 
6WD1103 (rnhB)1058063..1058659 [+], 59742520908ribonuclease HII 
7WD11041058663..1059445 [-], 78342520909hypothetical protein  VirB9
8WD11051059631..1060086 [-], 45642520910ABC transporter, periplasmic substrate-binding protein 
9WD11061060089..1060403 [-], 31542520911hypothetical protein 
10WD11071060468..1061934 [+], 146742520912monovalent cation/H+ antiporter subunit D 
11WD1108 (rodA)1061988..1063091 [+], 110442520913rod shape-determining protein RodA 
 
Region 7: 1118862..1121228
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD11681114989..1115084 [+], 9642520966hypothetical protein 
2WD11691115458..1115979 [+], 52242520967cytochrome b561 
3WD1170 (fabK)1115985..1117013 [+], 102942520968enoyl-ACP reductase 
4WD11711117169..1118353 [+], 118542520969hypothetical protein 
5WD11721118452..1118829 [+], 37842520970hypothetical protein 
6WD11731118862..1121228 [+], 236742520971type IV secretion system protein VirB4  VirB4
7WD11741121188..1124070 [+], 288342520972hypothetical protein 
8WD11751124191..1124676 [+], 48642520973hypothetical protein 
9WD11761124673..1125164 [-], 49242520974hypothetical protein 
 
Region 8: 1230956..1231975
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1WD12841227091..1228518 [+], 142842521079sensor histidine kinase 
2WD1285 (bcp)1228708..1229175 [+], 46842521080bacterioferritin comigratory protein 
3WD1286 (recF)1229192..1230289 [+], 109842521081recombination protein F 
4WD12871230623..1230727 [-], 10542521082hypothetical protein 
5WD12881230956..1231135 [-], 18042521083hypothetical protein  VirB2
6WD12891231380..1231733 [-], 35442521084hypothetical protein  VirB2
7WD12901231751..1231975 [-], 22542521085hypothetical protein  VirB2
8WD12911231965..1232102 [+], 13842521086hypothetical protein 
9WD12921232214..1233029 [+], 81642521087ribonuclease BN family protein 
10WD12931233040..1233771 [+], 73242521088short chain dehydrogenase/reductase family oxidoreductase 
11WD12941233896..1234093 [-], 19842521089hypothetical protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Wu M; Sun LV; Vamathevan J; Riegler M; Deboy R; Brownlie JC; McGraw EA; Martin W; Esser C; Ahmadinejad N; Wiegand C; Madupu R; Beanan MJ; Brinkac LM; Daugherty SC; Durkin AS; Kolonay JF; Nelson WC; Mohamoud Y; Lee P; Berry K; Young MB; Utterback T; Weidman J; Nierman WC; Paulsen IT; Nelson KE; Tettelin H; O'Neill SL; Eisen JA (2004). Phylogenomics of the reproductive parasite Wolbachia pipientis wMel: a streamlined genome overrun by mobile genetic elements. PLoS Biol. 2(3):E69. [PudMed:15024419] experimental
 
experimental This literature contains experimental investigation

Genomics & Bioinformatics Group in MML, SJTU