SecReT4

T4SS
References

T4SS ID	460
Strain	Methylovorus glucosetrophus SIP3-4
Replicon	plasmid pMsip01 [Browse all T4SS(s) in this replicon]
Accession	NC_012970
Location	28058..32882; 53214..62702
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	0	1

The information of T4SS components from NC_012970
Region 1: 28058..32882

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Msip34_2872	23376..23783 [-], 408	254003157	hypothetical protein
2	Msip34_2873	23843..24061 [-], 219	254003158	hypothetical protein
3	Msip34_2874	24273..24599 [-], 327	254003159	transcriptional modulator of MazE/toxin, MazF
4	Msip34_2875	24599..24832 [-], 234	254003160	transcriptional regulator/antitoxin, MazE
5	Msip34_2876	24917..26284 [-], 1368	254003161	diguanylate cyclase/phosphodiesterase
6	Msip34_2877	26286..28058 [-], 1773	254003162	DNA topoisomerase I
7	Msip34_2878	28058..28747 [-], 690	254003163	lytic transglycosylase	TrbN
8	Msip34_2879	28758..30410 [-], 1653	254003164	C-5 cytosine-specific DNA methylase
9	Msip34_2880	30423..32882 [-], 2460	254003165	TRAG family protein	TraG
10	Msip34_2881	33156..33899 [+], 744	254003166	hypothetical protein
11	Msip34_2882	34032..36092 [-], 2061	254003167	hypothetical protein
12	Msip34_2883	36082..36228 [-], 147	254003168	hypothetical protein

Region 2: 53214..62702

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Msip34_2894	48662..48769 [-], 108	254003179	hypothetical protein
2	Msip34_2895	48787..50289 [-], 1503	254003180	AAA ATPase
3	Msip34_2896	50357..51472 [-], 1116	254003181	parB-like partition protein
4	Msip34_2897	51496..52236 [-], 741	254003182	Cobyrinic acid ac-diamide synthase
5	Msip34_2898	52229..52483 [-], 255	254003183	hypothetical protein
6	Msip34_2899	52674..53114 [-], 441	254003184	hypothetical protein
7	Msip34_2900	53214..54485 [-], 1272	254003185	conjugation TrbI family protein	TrbI
8	Msip34_2901	54495..55406 [-], 912	254003186	Conjugal transfer protein TrbG/VirB9/CagX	TrbG
9	Msip34_2902	55448..56158 [-], 711	254003187	Conjugal transfer protein	TrbF
10	Msip34_2903	56169..57518 [-], 1350	254003188	P-type conjugative transfer protein TrbL	TrbL
11	Msip34_2904	57712..58461 [-], 750	254003189	P-type conjugative transfer protein TrbJ	TrbJ
12	Msip34_2905	58522..60996 [-], 2475	254003190	CagE TrbE VirB component of type IV transporter system	TrbE
13	Msip34_2906	61024..61353 [-], 330	254003191	conjugal transfer protein	TrbD
14	Msip34_2907	61346..61777 [-], 432	254003192	Conjugal transfer protein TrbC	TrbC
15	Msip34_2908	61737..62702 [-], 966	254003193	P-type conjugative transfer ATPase TrbB	TrbB
16	Msip34_2909	62712..62987 [-], 276	254003194	hypothetical protein
17	Msip34_2910	63149..64075 [+], 927	254003195	hypothetical protein
18	Msip34_2911	64078..64635 [+], 558	254003196	hypothetical protein
19	Msip34_2912	64635..66314 [+], 1680	254003197	type IVB pilus formation outer membrane protein, R64 PilN family
20	Msip34_2913	66317..67636 [+], 1320	254003198	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_012970