SecReT4

T4SS
References

T4SS ID	431
Strain	Pseudomonas syringae pv. maculicola plasmid pPMA4326A (NC_005918)
Replicon	plasmid pPMA4326A [Browse all T4SS(s) in this replicon]
Accession	NC_005918
Location	17976..33299
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_005918

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PMA4326A16 (yafA)	13469..13807 [+], 339	49188536	stability/partitioning determinant
2	PMA4326A17	14012..14989 [+], 978	49188537	IS1406 transposase
3	PMA4326A18	15338..15724 [-], 387	49188538	hypothetical protein
4	PMA4326A19 (bip)	15966..16436 [-], 471	49188539	bacteriocin immunity protein
5	PMA4326A20	16524..16874 [-], 351	49188540	pbsX-like transcriptional regulator
6	PMA4326A21	17139..17666 [+], 528	49188541	transcriptional regulator
7	PMA4326A22	17732..17947 [+], 216	49188542	hypothetical protein
8	PMA4326A23 (virB1)	17976..18674 [+], 699	49188543	VirB1	VirB1
9	PMA4326A24 (virB2)	18671..19009 [+], 339	49188544	VirB2	VirB2
10	PMA4326A25 (virB3)	19022..19498 [+], 477	49188545	VirB3	VirB3
11	PMA4326A26 (virB4)	19359..21911 [+], 2553	49188546	VirB4	VirB4
12	PMA4326A27 (virB5)	21908..22594 [+], 687	49188547	VirB5	VirB5
13	PMA4326A28	22897..23130 [+], 234	49188548	hypothetical protein
14	PMA4326A29 (virB6)	23141..24073 [+], 933	49188549	VirB6	VirB6
15	PMA4326A30 (virB7)	24141..24455 [+], 315	49188550	VirB7	VirB7
16	PMA4326A31 (virB8)	24492..25280 [+], 789	49188551	VirB8	VirB8
17	PMA4326A32 (virB9)	25270..26079 [+], 810	49188552	VirB9	VirB9
18	PMA4326A33 (virB10)	26204..27415 [+], 1212	49188553	VirB10	VirB10
19	PMA4326A34 (virB11)	27425..28483 [+], 1059	49188554	VirB11	VirB11
20	PMA4326A35	28493..28858 [+], 366	49188555	hypothetical protein
21	PMA4326A36	29219..29485 [+], 267	49188556	hypothetical protein
22	PMA4326A37	30074..31090 [+], 1017	49188557	hypothetical protein
23	PMA4326A38 (virD4)	31626..33299 [+], 1674	49188558	VirD4	VirD4
24	PMA4326A39 (kikA)	33340..33702 [+], 363	49188559	killer protein
25	PMA4326A40	33730..35895 [+], 2166	49188560	topoisomerase
26	PMA4326A41 (PMA4326A41)	35892..36446 [+], 555	49188561	hypothetical protein
27	PMA4326A42	36474..37034 [+], 561	49188562	single-stranded binding protein
28	PMA4326A43 (stbB)	37376..38095 [+], 720	49188563	stability/partitioning determinant

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Zhao Y; Ma Z; Sundin GW (2005). Comparative genomic analysis of the pPT23A plasmid family of Pseudomonas syringae. J Bacteriol. 187(6):2113-26. [PudMed:15743960]

(2) Stavrinides J; Guttman DS (2004). Nucleotide sequence and evolution of the five-plasmid complement of the phytopathogen Pseudomonas syringae pv. maculicola ES4326. J Bacteriol. 186(15):5101-15. [PudMed:15262947]

This literature contains bioinformatics investigation