SecReT4

T4SS
References

T4SS ID	360
Strain	Oligotropha carboxidovorans OM5
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_011386
Location	3555668..3566389
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	0	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	0	1

The information of T4SS components from NC_011386

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	OCAR_7594 (map)	3550904..3551731 [+], 828	209886703	methionine aminopeptidase
2	OCAR_7595	3551819..3552436 [+], 618	209886704	DNA repair protein RadC
3	OCAR_7596	3552585..3553838 [+], 1254	209886705	integrase
4	OCAR_7597	3553943..3554236 [+], 294	209886706	hypothetical protein
5	OCAR_7598	3554276..3554509 [-], 234	209886707	hypothetical protein
6	OCAR_7600	3555668..3556624 [-], 957	209886708	conjugal transfer protein TrbG/VirB9/CagX	TrbG
7	OCAR_7601	3556621..3557310 [-], 690	209886709	conjugal transfer protein TrbF	TrbF
8	OCAR_7602 (trbL1)	3557307..3558653 [-], 1347	209886710	conjugal transfer protein TrbL	TrbL
9	OCAR_7603	3558653..3558943 [-], 291	209886711	hypothetical protein
10	OCAR_7604 (trbJ1)	3558965..3559723 [-], 759	209886712	conjugal transfer protein TrbJ	TrbJ
11	OCAR_7605	3559720..3562176 [-], 2457	209886713	conjugal transfer ATPase TrbE	TrbE
12	OCAR_7606	3562191..3562472 [-], 282	209886714	conjugal transfer protein TrbB	TrbD
13	OCAR_7607	3562472..3562804 [-], 333	209886715	conjugal transfer protein TrbC	TrbC
14	OCAR_7608 (trbB1)	3562801..3563784 [-], 984	209886716	P-type conjugative transfer ATPase TrbB	TrbB
15	OCAR_7609	3563930..3564388 [-], 459	209886717	CopG family transcriptional regulator
16	OCAR_7610	3564398..3566389 [-], 1992	209886718	conjugal transfer coupling protein TraG	TraG
17	OCAR_7611	3566626..3567942 [-], 1317	209886719	LysR family transcriptional regulator
18	OCAR_7612	3568343..3568483 [+], 141	209886720	hypothetical protein
19	OCAR_7613	3569783..3570337 [+], 555	209886721	RNA polymerase sigma factor
20	OCAR_7614	3570334..3570975 [+], 642	209886722	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_011386