 T4SS ID | 299 |
| Strain | Agrobacterium rhizogenes plasmid pRi1724 (NC_002575) |
| Replicon | plasmid pRi1724 [Browse all T4SS(s) in this replicon] |
| Accession | NC_002575 |
| Location | 137408..159011 |
| Name | Trb |
| Function | NA |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | TrbB | TrbC | TrbD | TrbE | TrbF | TrbG | TrbH | TrbI | TrbJ |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Component | TrbK | TrbL | TrbN | TraF | TraG | ||||
| Number | 1 | 1 | 0 | 1 | 1 |
The information of T4SS components from NC_002575 | ||||||
  | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pRi1724_p109 (riorf108) | 134087..135580 [-], 1494 | 10954754 | hypothetical protein | ||
| 2 | pRi1724_p110 (riorf109) | 137408..139411 [-], 2004 | 10954755 | hypothetical protein | TraG | |
| 3 | pRi1724_p111 (riorf110) | 139398..139613 [-], 216 | 10954756 | hypothetical protein | ||
| 4 | pRi1724_p112 (riorf111) | 139618..139911 [-], 294 | 10954757 | hypothetical protein | ||
| 5 | pRi1724_p113 (riorf112) | 140166..143492 [+], 3327 | 10954758 | hypothetical protein | ||
| 6 | pRi1724_p114 (riorf113) | 143489..144055 [+], 567 | 10954759 | hypothetical protein | TraF | |
| 7 | pRi1724_p115 (riorf114) | 144045..145208 [+], 1164 | 10954760 | hypothetical protein | ||
| 8 | pRi1724_p116 (riorf115) | 145220..145831 [+], 612 | 10954761 | hypothetical protein | ||
| 9 | pRi1724_p117 (riorf116) | 146035..147600 [+], 1566 | 10954762 | hypothetical protein | ||
| 10 | pRi1724_p118 (riorf117) | 147691..147879 [-], 189 | 10954763 | hypothetical protein | ||
| 11 | pRi1724_p119 (riorf118) | 148115..148438 [+], 324 | 10954764 | hypothetical protein | ||
| 12 | pRi1724_p120 (riorf119) | 148442..149116 [-], 675 | 10954765 | hypothetical protein | ||
| 13 | pRi1724_p121 (riorf120) | 149495..150793 [-], 1299 | 10954766 | hypothetical protein | TrbI | |
| 14 | pRi1724_p122 (riorf121) | 150805..151245 [-], 441 | 10954767 | hypothetical protein | TrbH | |
| 15 | pRi1724_p123 (riorf122) | 151249..152061 [-], 813 | 10954768 | hypothetical protein | TrbG | |
| 16 | pRi1724_p124 (riorf123) | 152078..152740 [-], 663 | 10954769 | hypothetical protein | TrbF | |
| 17 | pRi1724_p125 (riorf124) | 152761..153942 [-], 1182 | 10954770 | hypothetical protein | TrbL | |
| 18 | pRi1724_p126 (riorf125) | 154020..154136 [-], 117 | 10954771 | hypothetical protein | TrbK | |
| 19 | pRi1724_p127 (riorf126) | 154133..154930 [-], 798 | 10954772 | hypothetical protein | TrbJ | |
| 20 | pRi1724_p128 (riorf127) | 154908..157358 [-], 2451 | 10954773 | hypothetical protein | TrbE | |
| 21 | pRi1724_p129 (riorf128) | 157369..157668 [-], 300 | 10954774 | hypothetical protein | TrbD | |
| 22 | pRi1724_p130 (riorf129) | 157661..158044 [-], 384 | 10954775 | hypothetical protein | TrbC | |
| 23 | pRi1724_p131 (riorf130) | 158034..159011 [-], 978 | 10954776 | hypothetical protein | TrbB | |
| 24 | pRi1724_p132 (riorf131) | 159021..159644 [-], 624 | 10954777 | hypothetical protein | ||
| 25 | pRi1724_p133 (riorf132) | 159961..161235 [+], 1275 | 10954778 | hypothetical protein | ||
| 26 | pRi1724_p134 (riorf133) | 161329..162336 [+], 1008 | 10954779 | hypothetical protein | ||
| 27 | pRi1724_p135 (riorf134) | 162503..163714 [+], 1212 | 10954780 | hypothetical protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| (1) Moriguchi K; Maeda Y; Satou M; Hardayani NS; Kataoka M; Tanaka N; Yoshida K (2001). The complete nucleotide sequence of a plant root-inducing (Ri) plasmid indicates its chimeric structure and evolutionary relationship between tumor-inducing (Ti) and symbiotic (Sym) plasmids in Rhizobiaceae. J Mol Biol. 307(3):771-84. [PudMed:11273700] |