SecReT4

T4SS
References

T4SS ID	289
Strain	Polymorphum gilvum SL003B-26A1
Replicon	plasmid pSL003B [Browse all T4SS(s) in this replicon]
Accession	NC_015258
Location	46789..56484
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	1	1	0	0	0

The information of T4SS components from NC_015258

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SL003B_p0057	42365..43276 [+], 912	328541598	Acetaldehyde dehydrogenase NahO
2	SL003B_p0059	43288..44313 [+], 1026	328541599	4-hydroxy-2-oxovalerate aldolase NahM
3	SL003B_p0032	44573..45178 [+], 606	328541600	Resolvase domain protein
4	SL003B_p0033	45193..46713 [+], 1521	328541601	Transposase Tn3
5	SL003B_p0034	46789..48102 [-], 1314	328541602	Conjugation TrbI-like protein	TrbI
6	SL003B_p0035	48114..48587 [-], 474	328541603	Conjugal transfer protein	TrbH
7	SL003B_p0036	48587..49462 [-], 876	328541604	P-type conjugative transfer protein TrbG	TrbG
8	SL003B_p0037	49459..50136 [-], 678	328541605	Conjugal transfer protein	TrbF
9	SL003B_p0038	50151..51347 [-], 1197	328541606	Conjugal transfer protein	TrbL
10	SL003B_p0039	51341..51472 [-], 132	328541607	entry-exclusion protein	TrbK
11	SL003B_p0040	51568..52329 [-], 762	328541608	P-type conjugative transfer protein TrbJ	TrbJ
12	SL003B_p0041	52349..54817 [-], 2469	328541609	Type IV secretion/conjugal transfer ATPase, VirB4 family	TrbE
13	SL003B_p0042	54827..55126 [-], 300	328541610	Conjugal transfer protein	TrbD
14	SL003B_p0043	55119..55523 [-], 405	328541611	Conjugal transfer protein	TrbC
15	SL003B_p0044	55513..56484 [-], 972	328541612	P-type conjugative transfer ATPase TrbB	TrbB
16	SL003B_p0045	56481..57116 [-], 636	328541613	Acyl-homoserine-lactone synthase
17	SL003B_p0046	57477..58694 [+], 1218	328541614	Replication protein A
18	SL003B_p0047	58917..59930 [+], 1014	328541615	Replication protein
19	SL003B_p0048	60140..61459 [+], 1320	328541616	Replication protein C

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_015258