T4SS ID	287
Strain	Burkholderia gladioli BSR3
Replicon	chromosome 1 [Browse all T4SS(s) in this replicon]
Accession	NC_015381
Location	2871875..2893870
Name	Trb
Function	conjugation
Classification	Type IVA; Type P
Bioinformatics investigation has been performed on this T4SS.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	1	1

The information of T4SS components from NC_015381
#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	bgla_1g24870	2866984..2868006 [+], 1023	330817362	hypothetical protein
2	bgla_1g24880	2868042..2869874 [+], 1833	330817363	hypothetical protein
3	bgla_1g24890	2869878..2871611 [+], 1734	330817364	DNA helicase
4	bgla_1g24900	2871651..2871878 [-], 228	330817365	hypothetical protein
5	bgla_1g24910	2871875..2873191 [-], 1317	330817366	conjugation TrbI family protein	TrbI
6	bgla_1g24920	2873194..2874192 [-], 999	330817367	P-type conjugative transfer protein TrbG	TrbG
7	bgla_1g24930	2874189..2874896 [-], 708	330817368	conjugal transfer protein TrbF	TrbF
8	bgla_1g24940	2874920..2876296 [-], 1377	330817369	TrbL/VirB6 plasmid conjugal transfer protein	TrbL
9	bgla_1g24950	2876308..2877036 [-], 729	330817370	P-type conjugative transfer protein TrbJ	TrbJ
10	bgla_1g24960	2877033..2879483 [-], 2451	330817371	ATPase	TrbE
11	bgla_1g24970	2879498..2879767 [-], 270	330817372	conjugal transfer protein trbD	TrbD
12	bgla_1g24980	2879764..2880147 [-], 384	330817373	conjugal transfer protein Trbc	TrbC
13	bgla_1g24990	2880144..2881163 [-], 1020	330817374	P-type conjugative transfer ATPase TrbB	TrbB
14	bgla_1g25000	2881160..2881636 [-], 477	330817375	CopG family transcriptional regulator
15	bgla_1g25010	2881633..2883636 [-], 2004	330817376	conjugal transfer protein TraG	TraG
16	bgla_1g25020	2883858..2884106 [-], 249	330817377	putative lipoprotein
17	bgla_1g25030	2884103..2885047 [-], 945	330817378	LysR family transcriptional regulator
18	bgla_1g25040	2885137..2886336 [-], 1200	330817379	hypothetical protein
19	bgla_1g25050	2886556..2887461 [-], 906	330817380	Pirin domain-containing protein
20	bgla_1g25060	2887563..2888171 [-], 609	330817381	putative acyl carrier protein phosphodiesterase
21	bgla_1g25080	2888692..2889711 [-], 1020	330817382	short-chain dehydrogenase/reductase SDR
22	bgla_1g25090	2889789..2890202 [+], 414	330817383	transposase
23	bgla_1g25100	2890252..2890692 [+], 441	330817384	transcriptional regulator
24	bgla_1g25110	2890870..2892831 [-], 1962	330817385	type IV secretory pathway VirD2 component
25	bgla_1g25120	2892828..2893271 [-], 444	330817386	hypothetical protein
26	bgla_1g25130	2893268..2893870 [-], 603	330817387	hypothetical protein	TraF
27	bgla_1g25140	2893867..2894400 [-], 534	330817388	hypothetical protein
28	bgla_1g25150	2894397..2894672 [-], 276	330817389	hypothetical protein
29	bgla_1g25160	2894669..2895307 [-], 639	330817390	cobyrinic Acid a,c-diamide synthase
30	bgla_1g25170	2895549..2896397 [-], 849	330817391	replication protein A
31	bgla_1g25180	2896412..2896693 [-], 282	330817392	hypothetical protein
32	bgla_1g25190	2896819..2897574 [-], 756	330817393	hypothetical protein
33	bgla_1g25200	2897898..2898248 [-], 351	330817394	hypothetical protein
34	bgla_1g25210	2898568..2898861 [+], 294	330817395	XRE family transcriptional regulator

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins        Genes

This T4SS is encoded by the integrative and conjugative element (ICE) ICEBglBSR3-1 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)

(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]

This literature contains bioinformatics investigation