SecReT4
T4SS ID257
StrainAcidovorax citrulli AAC00-1
Repliconchromosome [Browse all T4SS(s) in this replicon]
AccessionNC_008752
Location749121..749732; 777866..789835
NameTrb
Functionconjugation
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components
ComponentTrbBTrbCTrbDTrbETrbFTrbGTrbHTrbITrbJ
Number111111011
ComponentTrbKTrbLTrbNTraFTraG
Number01011

The information of T4SS components from NC_008752
Region 1: 749121..749732
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AAVE_RS03385744499..745023 [+], 5251822442299DUF2958 domain-containing protein 
2AAVE_RS03390745368..746138 [+], 771500117851DUF2285 domain-containing protein 
3AAVE_RS03395746250..746525 [+], 276499311745helix-turn-helix domain-containing protein 
4AAVE_RS03400746552..747397 [+], 846500117852replication initiator protein A 
5AAVE_RS24225747412..747666 [+], 2551174098247hypothetical protein 
6AAVE_RS03405747663..748301 [+], 639500117853AAA family ATPase 
7AAVE_RS03410748298..748582 [+], 285500117854hypothetical protein 
8AAVE_RS03415748579..749124 [+], 546500117855DUF2840 domain-containing protein 
9AAVE_RS03420749121..749732 [+], 612500117856S26 family signal peptidase  TraF
10AAVE_RS03425750181..752169 [+], 1989500117857relaxase/mobilization nuclease and DUF3363 domain-containing protein 
11AAVE_RS03435752223..753436 [+], 12141253027058IS3-like element ISAav4 family transposase 
 
Region 2: 777866..789835
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1AAVE_RS03540773878..774210 [+], 3331450148258multidrug efflux SMR transporter 
2AAVE_RS03550774530..776094 [+], 15651194615184IS3 family transposase 
3AAVE_RS03555776051..776359 [+], 3091174098250EamA family transporter 
4AAVE_RS24255776423..777367 [+], 945500117877LysR family transcriptional regulator 
5AAVE_RS03565777364..777630 [+], 267500117878EexN family lipoprotein 
6AAVE_RS25290777597..777830 [-], 2341595200947hypothetical protein 
7AAVE_RS03570777866..779872 [+], 2007500117879conjugal transfer protein TraG  TraG
8AAVE_RS03575779869..780345 [+], 477500117880ribbon-helix-helix protein, CopG family 
9AAVE_RS03580 (trbB)780342..781391 [+], 1050500117881P-type conjugative transfer ATPase TrbB  TrbB
10AAVE_RS03585781388..781774 [+], 387500117882TrbC/VirB2 family protein  TrbC
11AAVE_RS03590781771..782040 [+], 270500117883VirB3 family type IV secretion system protein  TrbD
12AAVE_RS03595782053..784503 [+], 2451500117884conjugal transfer protein TrbE  TrbE
13AAVE_RS03600 (trbJ)784500..785243 [+], 744500117885P-type conjugative transfer protein TrbJ  TrbJ
14AAVE_RS03605785256..785570 [+], 315500117886hypothetical protein 
15AAVE_RS03610 (trbL)785567..786958 [+], 1392500117887P-type conjugative transfer protein TrbL  TrbL
16AAVE_RS03615786988..787692 [+], 705500117888conjugal transfer protein TrbF  TrbF
17AAVE_RS03620 (trbG)787689..788693 [+], 1005500117889P-type conjugative transfer protein TrbG  TrbG
18AAVE_RS03625788696..789973 [+], 1278pseudogeneTrbI/VirB10 family protein 
19AAVE_RS03630789970..790215 [+], 246500117891DUF2274 domain-containing protein 
20AAVE_RS03635790634..791257 [+], 624500117892cupin domain-containing protein 
21AAVE_RS03640791334..792800 [+], 1467500117893MFS transporter 
22AAVE_RS03645792895..793182 [-], 288500117894DUF3567 domain-containing protein 
23AAVE_RS03650793471..794772 [-], 1302754217815DUF3108 domain-containing protein 
 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
This T4SS is encoded by the integrative and conjugative element (ICE) ICE(Tn4371)6036 and is thought to contribute to the transfer of this element. (click on the ICE name to view the detail ICE informaion in ICEberg, an ICE database)
(1) Ryan MP; Pembroke JT; Adley CC (2009). Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elements. BMC Microbiol. 0.543055556. [PudMed:19941653] in_silico
 
in_silico This literature contains bioinformatics investigation