SecReT4

T4SS
References

T4SS ID	242
Strain	Bradyrhizobium japonicum USDA 110
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_004463
Location	37305..43365; 9068090..9077553
Name	Trb
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	0	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	1	1	1

The information of T4SS components from NC_004463
Region 1: 37305..43365

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	blr0034	32885..33310 [+], 426	27375145	transposase
2	blr0035	33307..33663 [+], 357	27375146	hypothetical protein
3	bsr0036	33782..33952 [+], 171	27375147	hypothetical protein
4	blr0037	33965..34321 [+], 357	27375148	hypothetical protein
5	bsr0038	34579..34860 [+], 282	27375149	transcriptional regulator
6	bsr0039	35259..35498 [+], 240	27375150	hypothetical protein
7	bll0040	35827..36150 [-], 324	27375151	hypothetical protein
8	bsl0041	36259..36432 [-], 174	27375152	hypothetical protein
9	bll0042	36857..37297 [-], 441	27375153	hypothetical protein
10	bll0043 (traG)	37305..39332 [-], 2028	27375154	conjugal transfer coupling protein TraG	TraG
11	bll0044	39329..41203 [-], 1875	27375155	hypothetical protein
12	bll0045	41537..42445 [-], 909	27375156	transglycosylase	TrbN
13	bll0046	42450..42785 [-], 336	27375157	hypothetical protein
14	bll0047 (traF)	42820..43365 [-], 546	27375158	conjugal transfer protein	TraF
15	bll0048	43362..43880 [-], 519	27375159	hypothetical protein
16	bsl0049	43867..44133 [-], 267	27375160	hypothetical protein
17	bll0050	44130..44768 [-], 639	27375161	partition protein
18	bll0051 (repA)	44765..46042 [-], 1278	27375162	replication protein A
19	bll0052	45894..46265 [-], 372	27375163	hypothetical protein
20	bll0053	46349..47044 [-], 696	27375164	hypothetical protein
21	bsl0054	47255..47518 [-], 264	27375165	hypothetical protein
22	bsr0055	47732..47983 [+], 252	27375166	transcriptional regulator

Region 2: 9068090..9077553

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	blr8273	9063445..9064566 [+], 1122	27383384	transcriptional regulator
2	bll8274	9064872..9065573 [-], 702	27383385	hypothetical protein
3	bll8275	9065392..9066147 [-], 756	27383386	hypothetical protein
4	bll8276	9066200..9066865 [-], 666	27383387	hypothetical protein
5	bll8277	9066805..9067746 [-], 942	27383388	hypothetical protein
6	bsl8278	9067869..9068093 [-], 225	27383389	hypothetical protein
7	bll8279 (trbI)	9068090..9069292 [-], 1203	27383390	conjugal transfer protein	TrbI
8	bll8280 (trbG)	9069283..9070362 [-], 1080	27383391	conjugal transfer protein	TrbG
9	bll8281 (trbF)	9070359..9071048 [-], 690	27383392	conjugal transfer protein TrbF	TrbF
10	bll8282 (trbL)	9071052..9072413 [-], 1362	27383393	conjugal transfer protein TrbL	TrbL
11	bll8283	9072410..9072730 [-], 321	27383394	hypothetical protein
12	bll8284 (trbJ)	9072741..9073499 [-], 759	27383395	conjugal transfer protein TrbJ	TrbJ
13	bll8285 (trbE)	9073496..9075934 [-], 2439	27383396	conjugal transfer ATPase TrbE	TrbE
14	bsl8286 (trbD)	9075942..9076220 [-], 279	27383397	conjugal transfer protein	TrbD
15	bll8287 (trbC)	9076217..9076558 [-], 342	27383398	conjugal transfer protein	TrbC
16	bll8288 (trbB)	9076555..9077553 [-], 999	27383399	conjugal transfer protein	TrbB
17	blr8289	9077792..9078289 [+], 498	27383400	transposase
18	bll8290	9078152..9078973 [-], 822	27383401	transposase
19	bll8291	9078475..9079104 [-], 630	27383402	transposase
20	blr8292	9079279..9079632 [+], 354	27383403	hypothetical protein
21	bll8293	9079793..9080857 [-], 1065	27383404	transposase
22	bll8294	9081154..9081555 [-], 402	27383405	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Kaneko T; Nakamura Y; Sato S; Minamisawa K; Uchiumi T; Sasamoto S; Watanabe A; Idesawa K; Iriguchi M; Kawashima K; Kohara M; Matsumoto M; Shimpo S; Tsuruoka H; Wada T; Yamada M; Tabata S (2002). Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. DNA Res. 9(6):189-97. [PudMed:12597275]