SecReT4

T4SS
References

T4SS ID	182
Strain	Yersinia pseudotuberculosis plasmid pGDT4 (NC_011759)
Replicon	plasmid pGDT4 [Browse all T4SS(s) in this replicon]
Accession	NC_011759
Location	3657..22587; 91198..93901
Name	Tra_I
Function	conjugation
Classification	Type IVB; Type I
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraH_I	TraI_I	TraJ_I	TraK_I	TraL_I	TraM_I	TraN_I	TraO_I	TraP_I
Number	1	1	1	1	1	1	1	1	1
Component	TraQ_I	TraR_I	TraS_I	TraT_I	TraU_I	TraV_I	TraW_I	TraX_I	TraY_I
Number	1	1	0	1	1	0	1	0	1
Component	TrbA_I	TrbB_I	TrbC_I
Number	1	1	1

The information of T4SS components from NC_011759
Region 1: 3657..22587

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pGDT4_0001	79..3648 [+], 3570	218534616	DNA primase
2	pGDT4_0002	3657..4088 [+], 432	218534617	TraL protein	TraL_I
3	pGDT4_0003	4133..4816 [+], 684	218534618	TraM protein	TraM_I
4	pGDT4_0004	4830..5822 [+], 993	218534619	TraN protein	TraN_I
5	pGDT4_0005	5826..7142 [+], 1317	218534620	TraO protein	TraO_I
6	pGDT4_0006	7160..7960 [+], 801	218534621	TraP protein	TraP_I
7	pGDT4_0007	7971..8510 [+], 540	218534622	TraQ protein	TraQ_I
8	pGDT4_0008	8651..9046 [+], 396	218534623	TraR protein	TraR_I
9	pGDT4_0009	9107..9565 [+], 459	218534624	hypothetical protein
10	pGDT4_0010	9620..10237 [+], 618	218534625	TraT protein	TraT_I
11	pGDT4_0011	10239..13313 [+], 3075	218534626	TraU protein	TraU_I
12	pGDT4_0012	13322..14521 [+], 1200	218534627	TraW protein	TraW_I
13	pGDT4_0013	14553..17285 [+], 2733	364556392	TraXY protein	TraY_I
14	pGDT4_0014	17364..17999 [+], 636	218534629	exclusion-determining protein
15	pGDT4_0015	18107..19399 [+], 1293	218534630	TrbA protein	TrbA_I
16	pGDT4_0016	19414..20391 [+], 978	218534631	TrbB protein	TrbB_I
17	pGDT4_0017	20404..22587 [+], 2184	218534632	TrbC protein	TrbC_I
18	pGDT4_0018	22598..23128 [+], 531	218534633	putative endonuclease
19	pGDT4_0019	23149..23466 [+], 318	218534634	hypothetical protein
20	pGDT4_0020	23554..23736 [+], 183	218534635	hypothetical protein
21	pGDT4_0021	24098..24670 [-], 573	218534636	hypothetical protein
22	pGDT4_0022	24708..26603 [-], 1896	218534637	relaxase/mobilization nuclease MobA
23	pGDT4_0023	26606..26929 [-], 324	218534638	mobilization protein MobB
24	pGDT4_0024	27188..27511 [+], 324	218534639	MobC protein

Region 2: 91198..93901

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	pGDT4_0093	86926..87864 [+], 939	218534707	PilR protein
2	pGDT4_0094	87928..88515 [+], 588	218534708	PilS protein
3	pGDT4_0095	88585..89076 [+], 492	218534709	PilT protein
4	pGDT4_0096	89106..89753 [+], 648	218534710	PilU protein
5	pGDT4_0097	89810..91147 [+], 1338	218534711	PilV protein
6	pGDT4_0098	91198..91653 [+], 456	218534712	TraH protein	TraH_I
7	pGDT4_0099	91731..92438 [+], 708	218534713	TraI protein	TraI_I
8	pGDT4_0100	92443..93609 [+], 1167	218534714	TraJ protein	TraJ_I
9	pGDT4_0101	93641..93901 [+], 261	218534715	TraK protein	TraK_I
10	pGDT4_0102	93981..94463 [+], 483	218534716	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Lesic B; Zouine M; Ducos-Galand M; Huon C; Rosso ML; Prevost MC; Mazel D; Carniel E (2012). A natural system of chromosome transfer in Yersinia pseudotuberculosis. PLoS Genet. 8(3):e1002529. [PudMed:22412380]