SecReT4

T4SS
References

T4SS ID	172
Strain	Escherichia coli plasmid pO113 (NC_007365)
Replicon	plasmid pO113 [Browse all T4SS(s) in this replicon]
Accession	NC_007365
Location	19755..59660
Name	Tra_I
Function	conjugation
Classification	Type IVB; Type I
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraH_I	TraI_I	TraJ_I	TraK_I	TraL_I	TraM_I	TraN_I	TraO_I	TraP_I
Number	1	1	1	1	1	1	1	1	1
Component	TraQ_I	TraR_I	TraS_I	TraT_I	TraU_I	TraV_I	TraW_I	TraX_I	TraY_I
Number	1	1	1	1	1	1	1	1	1
Component	TrbA_I	TrbB_I	TrbC_I
Number	1	1	1

The information of T4SS components from NC_007365

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	LH0017	16322..16612 [+], 291	73853194	hypothetical protein
2	LH0018 (artA)	16704..17024 [-], 321	73853195	hypothetical protein
3	LH0019 (traE)	17284..18105 [+], 822	73853196	hypothetical protein
4	LH0022 (traH)	19755..20207 [+], 453	73853197	lipoprotein	TraH_I
5	LH0023 (traI)	20204..21040 [+], 837	73853198	lipoprotein	TraI_I
6	LH0024 (traJ)	21024..22172 [+], 1149	73853199	ATP-binding protein	TraJ_I
7	LH0025 (traK)	22169..22459 [+], 291	73853200	hypothetical protein	TraK_I
8	LH0026 (sogL)	22523..26539 [+], 4017	73853201	DNA primase competative inhibitor
9	LH0027 (traL)	26556..26906 [+], 351	73853202	hypothetical protein	TraL_I
10	LH0028 (traM)	26918..27613 [+], 696	73853203	hypothetical protein	TraM_I
11	LH0029 (traN)	27624..28598 [+], 975	73853204	hypothetical protein	TraN_I
12	LH0030 (traO)	28602..29933 [+], 1332	73853205	hypothetical protein	TraO_I
13	LH0031 (traP)	29930..30643 [+], 714	73853206	hypothetical protein	TraP_I
14	LH0032 (traQ)	30643..31170 [+], 528	73853207	hypothetical protein	TraQ_I
15	LH0033 (traR)	31217..31615 [+], 399	73853208	hypothetical protein	TraR_I
16	LH0034 (traS)	31672..31923 [+], 252	73853209	hypothetical protein	TraS_I
17	LH0035 (traT)	31838..32656 [+], 819	73853210	hypothetical protein	TraT_I
18	LH0036	32711..32860 [+], 150	73853211	hypothetical protein
19	LH0037	33067..33450 [+], 384	73853212	hypothetical protein
20	LH0038 (traU)	33625..36669 [+], 3045	73853213	nucleotide-binding protein	TraU_I
21	LH0039 (traV)	36669..37286 [+], 618	73853214	hypothetical protein	TraV_I
22	LH0040 (traW)	37247..38452 [+], 1206	73853215	lipoprotein	TraW_I
23	LH0041 (traX)	38449..39018 [+], 570	73853216	hypothetical protein	TraX_I
24	LH0042 (traY)	39091..41256 [+], 2166	73853217	hypothetical protein	TraY_I
25	LH0043 (excA)	41327..41977 [+], 651	73853218	surface exclusion protein
26	LH0044	42251..43213 [+], 963	73853219	hypothetical protein
27	LH0045	43162..43836 [+], 675	73853220	hypothetical protein
28	LH0046 (pndA)	43974..44126 [-], 153	73853221	post-segregation killing protein
29	LH0047 (pndC)	43981..44265 [-], 285	73853222	plasmid stability protein
30	LH0048	44340..44702 [+], 363	73853223	hypothetical protein
31	LH0049	44795..46339 [-], 1545	73853224	membrane-associated, metal-dependent hydrolase
32	LH0050	46531..46986 [-], 456	73853225	hypothetical protein
33	LH0051	47074..47697 [-], 624	73853226	hypothetical protein
34	LH0053 (epeA)	48716..52795 [+], 4080	73853227	autotransporter protease
35	LH0057	53251..53610 [-], 360	73853228	hypothetical protein
36	LH0056	53302..53667 [+], 366	73853229	hypothetical protein
37	LH0058	53677..53868 [+], 192	73853230	hypothetical protein
38	LH0059	53896..54207 [+], 312	73853231	neurotensin receptor R8
39	LH0060 (trbA)	54990..56261 [+], 1272	73853232	conjugal transfer protein	TrbA_I
40	LH0061 (trbB)	56258..57376 [+], 1119	73853233	conjugal transfer protein	TrbB_I
41	LH0062 (trbC)	57357..59660 [+], 2304	73853234	conjugal transfer protein	TrbC_I
42	LH0063	59786..60088 [+], 303	73853235	hypothetical protein
43	LH0064	60165..60614 [-], 450	73853236	hypothetical protein
44	LH0065 (nikB)	60682..63393 [-], 2712	73853237	relaxase
45	LH0066 (nikA)	63405..63824 [-], 420	73853238	relaxosome component
46	LH0067 (yggA)	63968..64303 [+], 336	73853239	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Leyton DL; Sloan J; Hill RE; Doughty S; Hartland EL (2003). Transfer region of pO113 from enterohemorrhagic Escherichia coli: similarity with R64 and identification of a novel plasmid-encoded autotransporter, EpeA. Infect Immun. 71(11):6307-19. [PudMed:14573650]