SecReT4

T4SS
References

T4SS ID	171
Strain	Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188 plasmid pCVM29188_101 (NC_011077)
Replicon	plasmid pCVM29188_101 [Browse all T4SS(s) in this replicon]
Accession	NC_011077
Location	46904..77702
Name	Tra_I
Function	NA
Classification	Type IVB; Type I
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraH_I	TraI_I	TraJ_I	TraK_I	TraL_I	TraM_I	TraN_I	TraO_I	TraP_I
Number	1	1	1	1	1	1	1	1	1
Component	TraQ_I	TraR_I	TraS_I	TraT_I	TraU_I	TraV_I	TraW_I	TraX_I	TraY_I
Number	1	1	1	1	1	1	1	1	1
Component	TrbA_I	TrbB_I	TrbC_I
Number	1	1	1

The information of T4SS components from NC_011077

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	SeKA_C0073	42116..42280 [+], 165	194447035	hypothetical protein
2	SeKA_C0074	42322..43170 [+], 849	194447066	hypothetical protein
3	SeKA_C0075	43256..43591 [-], 336	194446989	hypothetical protein
4	SeKA_C0076	43581..43697 [-], 117	194447091	hypothetical protein
5	SeKA_C0077	43825..44157 [+], 333	194447029	relaxosome component
6	SeKA_C0078	44168..46867 [+], 2700	194447093	putative relaxase/mobilization nuclease domain protein
7	SeKA_C0079	46904..49195 [-], 2292	194447057	TrbC	TrbC_I
8	SeKA_C0080	49188..50258 [-], 1071	194447010	TrbB	TrbB_I
9	SeKA_C0081	50277..51485 [-], 1209	194447072	conjugal transfer protein	TrbA_I
10	SeKA_C0082	51777..51929 [+], 153	194446997	hypothetical protein
11	SeKA_C0083	52001..52252 [-], 252	194447100	hypothetical protein
12	SeKA_C0084	52295..52459 [+], 165	194447006	hypothetical protein
13	SeKA_C0085	52456..52569 [+], 114	194447042	hypothetical protein
14	SeKA_C0086	52613..53392 [-], 780	194447071	transposase/IS protein
15	SeKA_C0087	53392..54414 [-], 1023	194447102	IS100 transposase orfA
16	SeKA_C0088	54839..55003 [+], 165	194447028	hypothetical protein
17	SeKA_C0089	55135..55311 [-], 177	194447075	hypothetical protein
18	SeKA_C0090	55340..55468 [-], 129	194447033	hypothetical protein
19	SeKA_C0091	55703..55912 [+], 210	194447106	hypothetical protein
20	SeKA_C0092	55984..56646 [-], 663	194447036	exclusion-determining protein
21	SeKA_C0093	56717..58954 [-], 2238	194447067	integral membrane protein	TraY_I
22	SeKA_C0094	58982..59566 [-], 585	194447105	TraX	TraX_I
23	SeKA_C0095	59595..60797 [-], 1203	194446992	lipoprotein	TraW_I
24	SeKA_C0096	60764..61378 [-], 615	194447008	TraV	TraV_I
25	SeKA_C0097	61378..64422 [-], 3045	194447108	TraU	TraU_I
26	SeKA_C0098	64512..65312 [-], 801	194447002	hypothetical protein	TraT_I
27	SeKA_C0099	65296..65484 [-], 189	194447112	hypothetical protein	TraS_I
28	SeKA_C0100	65548..65952 [-], 405	194447041	TraR	TraR_I
29	SeKA_C0101	66003..66530 [-], 528	194447082	TraQ	TraQ_I
30	SeKA_C0102	66530..67234 [-], 705	194446991	TraP	TraP_I
31	SeKA_C0103	67234..68523 [-], 1290	194446999	TraO	TraO_I
32	SeKA_C0104	68526..69509 [-], 984	194447090	TraN	TraN_I
33	SeKA_C0105	69520..70212 [-], 693	194446993	TraM	TraM_I
34	SeKA_C0106	70209..70556 [-], 348	194447088	TraL	TraL_I
35	SeKA_C0107	70574..74341 [-], 3768	194447032	DNA primase
36	SeKA_C0108	74431..74982 [-], 552	194447048	chain A, Crystal Structure Of A Phospholipase D Family Member, Nuc
37	SeKA_C0109	74997..75287 [-], 291	194447080	TraK	TraK_I
38	SeKA_C0110 (traJ)	75284..76432 [-], 1149	194447021	plasmid transfer ATPase TraJ	TraJ_I
39	SeKA_C0111	76429..77247 [-], 819	194447119	lipoprotein	TraI_I
40	SeKA_C0112	77244..77702 [-], 459	194447009	lipoprotein	TraH_I
41	SeKA_C0113	77934..78083 [+], 150	194447005	hypothetical protein
42	SeKA_C0114	78097..78681 [-], 585	194447059	TraG
43	SeKA_C0115	78741..79943 [-], 1203	194447121	TraF
44	SeKA_C0116	80029..80853 [-], 825	194447016	TraE
45	SeKA_C0117	81004..82191 [-], 1188	194447018	shufflon-specific DNA recombinase

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Fricke WF; McDermott PF; Mammel MK; Zhao S; Johnson TJ; Rasko DA; Fedorka-Cray PJ; Pedroso A; Whichard JM; Leclerc JE; White DG; Cebula TA; Ravel J (2009). Antimicrobial resistance-conferring plasmids with similarity to virulence plasmids from avian pathogenic Escherichia coli strains in Salmonella enterica serovar Kentucky isolates from poultry. Appl Environ Microbiol. 75(18):5963-71. [PudMed:19648374]