SecReT4

T4SS
References

T4SS ID	163
Strain	Salmonella enterica subsp. enterica serovar Typhimurium plasmid R621a (NC_015965)
Replicon	plasmid R621a [Browse all T4SS(s) in this replicon]
Accession	NC_015965
Location	40508..71773
Name	Tra_I
Function	NA
Classification	Type IVB; Type I
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	TraH_I	TraI_I	TraJ_I	TraK_I	TraL_I	TraM_I	TraN_I	TraO_I	TraP_I
Number	1	1	1	1	1	1	1	1	1
Component	TraQ_I	TraR_I	TraS_I	TraT_I	TraU_I	TraV_I	TraW_I	TraX_I	TraY_I
Number	1	1	1	1	1	1	1	1	1
Component	TrbA_I	TrbB_I	TrbC_I
Number	1	1	1

The information of T4SS components from NC_015965

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	R621a_p049 (ygfB)	35927..36775 [+], 849	345134048	protein YgfB
2	R621a_p050 (yggA)	36860..37195 [-], 336	345134049	protein YggA
3	R621a_p051 (nikA)	37429..37761 [+], 333	345134050	NikA oriT-specific DNA-binding protein
4	R621a_p052 (nikB)	37772..40471 [+], 2700	345134051	NikB relaxase
5	R621a_p053 (trbC)	40508..42799 [-], 2292	345134052	TrbC transfer protein	TrbC_I
6	R621a_p054 (trbB)	42792..43862 [-], 1071	345134053	protein disulfide isomerase	TrbB_I
7	R621a_p055 (trbA)	43881..45089 [-], 1209	345134054	TrbA transfer protein	TrbA_I
8	R621a_p056 (finQ)	45396..46481 [-], 1086	345134055	fertility inhibition protein
9	R621a_p057 (pndC)	46744..46947 [+], 204	345134056	post-segregation killing protein
10	R621a_p058 (pndA)	46802..46954 [+], 153	345134057	post-segregation killing protein
11	R621a_p059 (excA)	48762..49376 [-], 615	345134058	surface exclusion protein
12	R621a_p060 (traY)	49452..51689 [-], 2238	345134059	TraY integral membrane protein	TraY_I
13	R621a_p061 (traX)	51717..52301 [-], 585	345134060	TraX transfer protein	TraX_I
14	R621a_p062 (traW)	52330..53532 [-], 1203	345134061	TraW lipoprotein	TraW_I
15	R621a_p063 (traV)	53499..54113 [-], 615	345134062	TraV transfer protein	TraV_I
16	R621a_p064 (traU)	54113..57157 [-], 3045	345134063	TraU nucleotide-binding protein	TraU_I
17	R621a_p065 (insD)	57170..58075 [-], 906	345134064	IS2 transposase InsD
18	R621a_p066 (insA)	58033..58398 [-], 366	345134065	IS2 OrfA protein
19	R621a_p067 (traT)	58583..59383 [-], 801	345134066	TraT transfer protein	TraT_I
20	R621a_p068 (traS)	59367..59555 [-], 189	345134067	TraS transfer protein	TraS_I
21	R621a_p069 (traR)	59619..60023 [-], 405	345134068	TraR transfer protein	TraR_I
22	R621a_p070 (traQ)	60074..60601 [-], 528	345134069	TraQ transfer protein	TraQ_I
23	R621a_p071 (traP)	60601..61305 [-], 705	345134070	TraP transfer protein	TraP_I
24	R621a_p072 (traO)	61305..62594 [-], 1290	345134071	TraO transfer protein	TraO_I
25	R621a_p073 (traN)	62597..63580 [-], 984	345134072	TraN transfer protein	TraN_I
26	R621a_p074 (traM)	63591..64283 [-], 693	345134073	TraM transfer protein	TraM_I
27	R621a_p075 (traL)	64280..64627 [-], 348	345134074	TraL transfer protein	TraL_I
28	R621a_p076 (sogL)	64645..68412 [-], 3768	345134075	SogL DNA primase
29	R621a_p077 (sogS)	64645..67179 [-], 2535	345134076	SogS transfer protein
30	R621a_p078 (nuc)	68502..69053 [-], 552	345134077	EDTA-resistant nuclease
31	R621a_p079 (traK)	69068..69358 [-], 291	345134078	TraK transfer protein	TraK_I
32	R621a_p080 (traJ)	69355..70503 [-], 1149	345134079	TraJ transfer ATPase	TraJ_I
33	R621a_p081 (traI)	70500..71318 [-], 819	345134080	TraI lipoprotein	TraI_I
34	R621a_p082 (traH)	71315..71773 [-], 459	345134081	TraH lipoprotein	TraH_I
35	R621a_p083 (traG)	72167..72751 [-], 585	345134082	histidine phosphatase domain-containing protein
36	R621a_p084 (traF)	72811..74013 [-], 1203	345134083	protein TraF
37	R621a_p085 (traE)	74099..74923 [-], 825	345134084	protein TraE
38	R621a_p086 (rci)	75074..76228 [-], 1155	345134085	shufflon-specific DNA reconbinase
39	R621a_p087	76293..76538 [+], 246	345134086	PilVB C-terminal segment

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Takahashi H; Shao M; Furuya N; Komano T (2011). The genome sequence of the incompatibility group Igamma plasmid R621a: evolution of IncI plasmids. Plasmid. 66(2):112-21. [PudMed:21763721]