| Protein ID: 9507649 |
 T4SS name [ID] | Tra_F [114] |
| Gene symbol | traD |
| Locus tag | D742_p2075 |
| Strain | Plasmid R100 |
| Replicon | plasmid R100 [GenBank: NC_002134] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 76250..78466 [+] |
| Product | hypothetical protein |
| Component type | TraD_F |
| UniProt ID | Q7AK62 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 5e-148, Aligned region: 172..561 TraD_N [PF12615], Evalue: 2.4e-33, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1.1e-18, Aligned region: 419..541 AAA_10 [PF12846], Evalue: 2e-10, Aligned region: 187..491 T4SS-DNA_transf [PF02534], Evalue: 9.9e-08, Aligned region: 382..478 |
| Protein Sequence: 738 a.a. [Download] |
| >gi|9507649|ref|NP_052980.1| traD [Shigella flexneri 2b] MSFNAKDMTQGGQIASMRIRMFSQIANIMLYCLFIFFWILIGLVLWVKISWQTFINGCIYWWCTSLEGMR DLIKSQPVYEIQYYGKTFRMNAAQVLHDKYMIWCGEQLWSAFVLASVVALVICLITFFVVSWILGRQGKQ QSENEVTGGRQLTDNPKDVARMLKKDGKDSDIRIGDLPIIRDSEIQNFCLHGTVGAGKSEVIRRLANYAR QRGDMVVIYDRSGEFVKSYYDPSIDKILNPLDARCAAWDLWKECLTQPDFDNTANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDPNRSYSKLVDTLLSIKIEKLRTFLRNSPAANLVEEKIEKTAISIRAVLTNYVKA IRYLQGIEHNGDPFTIRDWMRGVREDQKNGWLFISSNADTHASLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEILPEARKFGGCYVFGIQSYAQLEDIYGEKAAATLFDVMNTRAFFRSPSHKIA EFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGKDMERQTLVSYSDIQSLPDLTCYVTLPGPYPAVKLSL KYQARPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPEVASGEDVTQAEQPQQPQQPQQPQQ PQQPQQPQQPQQPQQPVSSVINDKKSDAGVSVPAGGIEQELKMKPEEEMEQQLPPGISESGEVVDMAAYE AWQQENHPDIQQHMQRREEVNINVHRERGEDVEPGDDF |
| Nucleotide Sequence: 2217 bp [Download] |
| >gi|9507549|ref|NC_002134.1|:76250-78466 Shigella flexneri 2b plasmid R100 DNA, complete sequence ATGAGTTTTAACGCAAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATCCGCATGTTCAGCC AGATCGCCAATATCATGCTTTACTGCCTGTTTATTTTTTTCTGGATCCTCATTGGTCTGGTCTTATGGGT AAAAATAAGCTGGCAGACGTTTATCAACGGCTGTATTTACTGGTGGTGTACGTCACTGGAAGGCATGCGG GATTTAATAAAATCCCAGCCGGTCTATGAGATCCAGTATTACGGCAAAACCTTCCGGATGAACGCTGCCC AGGTACTGCATGATAAATATATGATCTGGTGCGGAGAGCAGCTATGGTCTGCATTCGTTCTGGCGTCTGT CGTGGCCCTGGTTATTTGCCTGATCACCTTCTTTGTTGTCTCCTGGATTCTGGGGCGTCAGGGTAAACAA CAGAGCGAAAATGAAGTCACAGGTGGTCGTCAGCTGACAGACAATCCGAAAGACGTTGCCCGGATGCTGA AAAAAGACGGCAAGGACTCCGATATCCGGATTGGCGACCTGCCGATTATCCGGGATTCCGAAATCCAGAA CTTCTGTCTGCACGGCACGGTCGGGGCCGGTAAGTCGGAGGTTATCCGTCGTCTGGCCAACTATGCCCGT CAGCGCGGTGATATGGTGGTGATTTATGACCGTTCAGGGGAATTTGTTAAAAGTTACTATGATCCCTCCA TCGATAAAATCCTGAATCCGCTGGATGCCCGCTGTGCCGCATGGGATTTGTGGAAGGAGTGCCTGACACA GCCGGATTTTGATAATACCGCGAACACGCTGATCCCGATGGGTACAAAAGAGGACCCGTTCTGGCAGGGT TCAGGACGTACCATTTTTGCGGAAGCGGCGTACCTGATGCGTAATGACCCCAACCGCAGCTACAGCAAAC TGGTGGACACACTGCTTTCCATCAAAATTGAAAAACTGCGTACCTTCCTGCGTAATTCACCGGCGGCCAA CCTGGTGGAAGAGAAAATTGAGAAAACGGCGATTTCCATCCGTGCTGTGCTGACCAACTACGTGAAAGCC ATCCGTTACCTGCAGGGGATTGAGCATAACGGTGATCCCTTCACCATCCGTGACTGGATGCGTGGTGTCC GGGAAGATCAGAAAAACGGCTGGCTGTTTATTTCGTCGAACGCCGACACCCATGCCTCCCTGAAGCCTGT GATCTCCATGTGGCTGTCCATTGCCATTCGTGGTCTGCTGGCAATGGGAGAAAACCGTAACCGTCGTGTG TGGTTTTTCTGTGATGAGTTACCCACGTTACACAAACTGCCGGATCTGGTGGAGATCCTGCCGGAAGCCC GTAAGTTCGGTGGCTGTTATGTGTTTGGTATCCAGTCCTATGCCCAGCTGGAAGATATCTACGGTGAGAA AGCGGCGGCCACGCTGTTTGACGTCATGAACACCCGTGCTTTTTTCCGTTCCCCGAGCCATAAGATTGCA GAGTTCGCTGCCGGTGAGATTGGTGAGAAAGAGCACCTGAAAGCCAGCGAGCAGTATTCCTACGGTGCTG ACCCGGTACGTGACGGGGTATCGACCGGTAAGGATATGGAGCGTCAGACGCTGGTCAGTTATTCCGACAT TCAGTCTCTGCCGGATCTGACCTGCTATGTCACTCTGCCCGGACCGTATCCGGCAGTCAAACTCTCTCTG AAATATCAGGCACGACCGAAGGTCGCTCCGGAGTTTATTCCGCGTGACATCAACCCGGAAATGGAGAACC GTCTGAGTGCCGTACTTGCCGCAAGGGAAGCAGAAGGTCGTCAGATGGCCAGCCTCTTTGAACCGGAGGT TGCCTCCGGAGAAGATGTGACTCAGGCTGAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACAG CCACAACAGCCACAACAGCCACAACAGCCACAACAGCCACAACAGCCAGTGTCTTCTGTCATCAATGATA AGAAGTCAGATGCAGGTGTGAGTGTTCCGGCAGGGGGGATCGAGCAGGAGCTGAAAATGAAACCGGAAGA AGAGATGGAACAGCAACTGCCACCCGGGATCAGTGAATCCGGTGAAGTGGTGGATATGGCCGCTTATGAG GCATGGCAACAGGAAAATCATCCGGACATCCAGCAGCATATGCAGCGTCGTGAAGAGGTGAACATTAATG TGCACCGGGAGCGCGGGGAGGATGTTGAGCCGGGAGATGATTTCTGA |