| Protein ID: 94311272 |
 T4SS name [ID] | Tfc [705] |
| Gene symbol | virD4 |
| Locus tag | Rmet_2336 |
| Strain | Cupriavidus metallidurans CH34 |
| Replicon | chromosome [GenBank: NC_007973] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 2548986..2551175 [+] |
| Product | VirD4, type IV secretory pathway, VirD4 components |
| Component type | Tfc6 |
| UniProt ID | Q1LKW3 |
| KEGG ID | rme:Rmet_2336 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TraG-D_C [PF12696], Evalue: 1.6e-14, Aligned region: 507..637 AAA_10 [PF12846], Evalue: 1.9e-09, Aligned region: 191..584 TrwB_AAD_bind [PF10412], Evalue: 2.1e-09, Aligned region: 509..649 |
| Protein Sequence: 729 a.a. [Download] |
| >gi|94311272|ref|YP_584482.1| virD4 gene product [Cupriavidus metallidurans CH34] MSGKQPVEVLLRPAVELYTVAACAGAAFLCLVAPWSLALSPAMGIGSALAFGAYGAIRYRDARIILRYRR NIRRLPRYVMTSKDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYVEPTPAYRLTRRLEERLEFAP LPLSRLPKLTGWDAPFNPVRPLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFV TQDIRRRNAAGEHEVVIVIDPKGDADLLKRMYVEAQRAGREGEFYIFHLGWPEISARYNAVGRFGRISEV ATRIAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKA WEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE KLTSGKIAQLLAPNYSDLADPRPIFDWMQVIRKRAVVYVGLDALSDAEVAAAVGNSMFSDLVSVAGHIYK HGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV IGNFNNLFMLRVRETATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMASVPMIEPS HVVGLPKGQCFALLQGGQLWKVRMPLPAPDPDEVMPTDLQQLAGYMRQSYSEATQWWEFTSSAALPHAAL PDDLLDDAAPAEPDAVATGADDSTGEAAP |
| Nucleotide Sequence: 2190 bp [Download] |
| >gi|94308945|ref|NC_007973.1|:2548986-2551175 Cupriavidus metallidurans CH34 chromosome, complete genome ATGTCGGGCAAACAGCCGGTCGAGGTTCTGCTACGCCCAGCGGTGGAGCTATACACCGTCGCGGCGTGTG CAGGCGCCGCGTTTCTGTGCCTGGTGGCCCCATGGTCGCTCGCGCTGAGCCCGGCCATGGGCATCGGCAG CGCCTTGGCGTTCGGCGCCTACGGCGCGATCCGCTACCGCGATGCCCGCATCATCCTGCGCTACCGGCGC AACATCCGCCGTCTGCCGCGTTACGTGATGACCAGCAAGGACGTGCCGGTCAGCCAGCAGCGCCTATTCG TGGGGCGCGGCTTTCTCTGGGAGCAGAAGCACACGCATCGGCTGATGCAGACGTACCGGCCCGAGTTCCG CCGCTACGTCGAGCCGACGCCGGCCTACCGGCTGACCAGGCGCCTGGAGGAACGGCTGGAGTTCGCGCCA TTGCCGCTCTCGCGCCTGCCGAAGCTCACCGGCTGGGACGCGCCTTTCAACCCCGTGCGCCCGTTGCCGC CTGTCGGCGGCCTGCCAAGGCTGCACGGCATCGAGCCCGACGAAGTGGACGTCAGCCTGCCGCTGGGCGA GCGCGTCGGGCACTCGCTGGTGCTGGGCACCACGCGGGTGGGCAAGACGCGCCTGGCCGAGTTGTTCGTC ACGCAGGACATCCGTCGCAGGAATGCTGCCGGCGAGCATGAGGTCGTCATCGTCATCGACCCCAAGGGGG ATGCCGATCTCTTGAAACGGATGTACGTCGAAGCCCAGCGCGCTGGCCGCGAAGGCGAGTTCTACATCTT CCACTTGGGCTGGCCGGAAATCAGCGCCCGCTACAACGCCGTGGGCCGCTTCGGTCGGATCTCGGAAGTG GCGACACGCATCGCGGGGCAGCTCTCCGGCGAAGGCAACAGCGCGGCGTTCCGCGAGTTCGCATGGCGCT TCGTGAACATCATCGCCCGCGCCCTGGTGGAACTGGGGCAGCGCCCGGACTACATGCTGATCCAGCGCCA CGTCATCAACATCGACGCGCTGTTCATTGAGTACGCCCAGCACTACTTTGCCAAGACGGAGCCCAAGGCC TGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCAAGGAACATGATCGGGCGCG AGAAGCGTGTGGTGGCGCTGGAGCAATACCTCTCCCAGGCGCGCAACTACGACCCTGTGCTCGATGGCCT GCGCTCGGCGGTGCGCTACGACAAGACCTACTTCGACAAGATCGTTGCATCGCTGCTGCCGCTGCTGGAA AAGCTCACGAGCGGCAAGATCGCCCAGCTCCTGGCGCCGAACTACTCCGACCTGGCCGACCCGCGCCCGA TCTTCGACTGGATGCAGGTGATCAGGAAGCGCGCCGTCGTCTATGTCGGCTTGGACGCGCTGTCCGATGC GGAGGTCGCCGCAGCGGTCGGCAACTCGATGTTCAGCGATCTCGTCTCGGTGGCTGGGCACATCTACAAG CACGGAATCGACGATGGCCTGCCGGGCGCATCGGCTGGTGCGCGCGTGCCGATCAACGTGCATGCGGACG AGTTCAATGAATTGATGGGTGACGAGTTCATTCCGCTCATCAACAAGGGCGGTGGCGCGGGCCTGCAAGT CACCGCCTACACGCAAACGCTTTCGGACATCGAGGCCCGCATCGGCAACCGCGCGAAGGCCGGCCAAGTG ATCGGGAATTTCAACAATTTATTCATGTTGCGCGTGCGCGAGACGGCCACCGCGGAACTGCTGACGAGGC AGTTGCCGAAGGTCGAGGTCTATACGACCACCATCGTCTCGGGCGCGACGGACAGCTCAGACATCCGCGG CGCGACGGACTTCACGTCGAACACCCAGGACCGCATCAGCATGGCCAGCGTGCCGATGATCGAGCCGTCA CACGTCGTCGGTCTGCCCAAGGGCCAATGCTTCGCGCTGCTGCAGGGCGGCCAGCTTTGGAAGGTGCGCA TGCCGCTTCCGGCGCCAGACCCCGATGAAGTGATGCCGACGGACTTGCAGCAACTGGCCGGGTATATGCG CCAGAGCTACAGCGAGGCCACGCAGTGGTGGGAGTTCACCAGTTCCGCAGCCTTGCCGCATGCAGCCTTG CCCGACGACCTGCTGGATGACGCCGCTCCAGCCGAGCCTGACGCGGTGGCCACCGGCGCCGACGACAGCA CCGGCGAGGCCGCACCATGA |