| Protein ID: 51473489 |
 T4SS name [ID] | VirB [498] |
| Gene symbol | virD4 |
| Locus tag | RT0284 |
| Strain | Rickettsia typhi str. Wilmington |
| Replicon | chromosome [GenBank: NC_006142] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 357721..359496 [+] |
| Product | type IV secretion system component VirD4 |
| Component type | VirD4 |
| UniProt ID | Q8GLV7, Q68X78 |
| KEGG ID | rty:RT0284 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 2.9e-168, Aligned region: 120..567 TraG-D_C [PF12696], Evalue: 2.1e-28, Aligned region: 404..526 TrwB_AAD_bind [PF10412], Evalue: 2e-21, Aligned region: 237..535 AAA_10 [PF12846], Evalue: 4.9e-05, Aligned region: 306..481 |
| Protein Sequence: 591 a.a. [Download] |
| >gi|51473489|ref|YP_067246.1| type IV secretion system component VirD4 [Rickettsia typhi str. Wilmington] MEWHKILKVTRNIFGHAIIHPVVIFCTIWISGVFIAIFTNEIGALGADINAINITYKWAYWLINVWRQLK IADYNYLKLKLIISLLGPAIIVIIFYIKNFQRIKSLQFFEQPEKVYGDASWANQSDIEAAGLRSKKGMLI GVDAGGYFVADGFQHALLFAPTGSGKGVGFVIPNLLFWTDSVVVHDIKLENHNLTSGWREKQGQKVFVWE PSNPDGITHCYNPIDWVSTKPGQMVDDVQKISNLIMPEKDFWNNEARSLFLGVTLYLIADPTKTKSFGEV VRTMRSDDVVYNLAVVLDTLGGVIHPVAYMNIAAFLQKADKERSGVISTMNSSLELWANPLIDSATASSD FNIQEFKKVKTTVYVGLTPDNIQRLQKLMQVFYQQATEFLSRKMPDLKEEPYGVMFLLDEFPTLGKMDTF KAGIAYFRGYRVRLFLIIQDTQQLKGTYEDAGMNSFLSNSTYRITFAANNYETANLISQLVGNKTVEQRS FSKPLFFDLNISTRTQNVSQVQRALLLPQEVIQLPRDEQIVLIESFPPIKSRKIKYYEDKFFTSRLLPPT FVPTQVPFNHVSNNSDASKETETTTAIENNE |
| Nucleotide Sequence: 1776 bp [Download] |
| >gi|51473215|ref|NC_006142.1|:357721-359496 Rickettsia typhi str. Wilmington, complete genome ATGGAATGGCATAAGATACTTAAAGTTACTAGGAATATATTCGGTCATGCTATAATTCATCCGGTTGTTA TTTTTTGCACCATTTGGATCAGTGGTGTGTTTATTGCAATTTTTACTAATGAGATCGGAGCTTTAGGTGC AGACATCAATGCTATAAATATTACTTATAAGTGGGCTTACTGGCTTATTAATGTTTGGCGGCAATTAAAA ATTGCCGATTATAATTATTTGAAATTGAAGCTAATTATATCTCTTCTTGGTCCTGCTATTATTGTTATAA TATTTTATATTAAAAATTTTCAAAGAATAAAATCATTACAATTTTTTGAGCAGCCTGAAAAAGTATATGG TGACGCTAGTTGGGCTAATCAGTCTGATATAGAAGCTGCTGGTCTTAGATCAAAAAAAGGCATGTTAATA GGTGTTGATGCTGGTGGATATTTTGTTGCAGATGGGTTTCAGCATGCTTTATTATTCGCACCTACCGGTT CAGGTAAAGGTGTTGGTTTTGTAATACCTAACCTTTTATTTTGGACTGATTCAGTAGTAGTACATGATAT AAAGCTTGAAAATCACAATTTGACTAGTGGTTGGCGTGAGAAACAAGGGCAAAAAGTTTTTGTTTGGGAA CCTTCTAATCCAGATGGTATTACACATTGTTATAATCCGATTGATTGGGTTAGTACTAAGCCTGGGCAAA TGGTTGATGATGTACAGAAAATTTCGAATCTTATAATGCCAGAAAAGGATTTTTGGAACAATGAAGCACG TAGTTTATTCTTAGGCGTAACTTTATATTTAATAGCTGATCCTACTAAAACTAAATCTTTCGGTGAAGTA GTACGTACAATGAGAAGTGACGATGTAGTTTATAATCTAGCCGTTGTACTTGATACGCTTGGTGGTGTAA TACATCCTGTTGCATATATGAATATTGCTGCATTTTTGCAAAAAGCTGATAAAGAGCGTTCCGGTGTAAT ATCTACAATGAATTCATCACTTGAATTATGGGCAAATCCACTTATTGATTCTGCTACTGCATCTTCTGAC TTCAATATACAAGAATTTAAAAAAGTTAAAACAACAGTGTATGTAGGATTAACACCTGATAATATACAGC GTTTGCAAAAATTAATGCAGGTATTTTATCAGCAGGCTACAGAATTTTTAAGCCGTAAAATGCCTGATTT AAAGGAGGAACCATATGGAGTAATGTTCTTACTTGATGAGTTCCCGACTCTTGGAAAGATGGATACTTTT AAAGCTGGTATCGCTTATTTTAGAGGTTATAGAGTTCGGTTATTTTTGATTATCCAAGATACGCAGCAAT TAAAAGGAACATATGAGGACGCCGGTATGAATTCTTTCTTATCTAATTCCACATATCGCATTACCTTTGC TGCTAATAACTATGAAACTGCAAATTTAATATCGCAGCTTGTTGGTAATAAGACTGTAGAACAAAGGTCA TTTAGTAAACCTTTATTTTTTGACCTTAATATTTCTACTAGAACCCAAAATGTATCTCAAGTTCAAAGAG CTTTACTTTTACCTCAAGAAGTAATACAGTTACCGCGAGATGAGCAAATTGTTTTAATTGAATCCTTCCC GCCTATAAAATCTCGTAAAATTAAGTATTACGAAGATAAGTTTTTTACTAGTAGATTATTACCGCCGACT TTTGTACCTACTCAAGTACCCTTTAATCATGTGTCAAATAATAGTGATGCTTCTAAAGAGACTGAAACAA CAACTGCTATCGAAAATAATGAGTAA |