| Protein ID: 47104044 |
 T4SS name [ID] | Tra_F [542] |
| Gene symbol | - |
| Locus tag | PBPRC0019 |
| Strain | Photobacterium profundum SS9 |
| Replicon | plasmid pPBPR1 [GenBank: NC_005871] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 19147..21252 [+] |
| Product | conjugative transfer protein TraD |
| Component type | TraD_F |
| UniProt ID | Q6LW78 |
| KEGG ID | ppr:PBPRC0019 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 1.9e-153, Aligned region: 180..565 TraD_N [PF12615], Evalue: 1.9e-22, Aligned region: 35..129 TraG-D_C [PF12696], Evalue: 1.8e-20, Aligned region: 423..545 T4SS-DNA_transf [PF02534], Evalue: 3.1e-16, Aligned region: 230..547 AAA_10 [PF12846], Evalue: 1.4e-14, Aligned region: 187..226 AAA_10 [PF12846], Evalue: 1.4e-14, Aligned region: 404..498 |
| Protein Sequence: 701 a.a. [Download] |
| >gi|47104044|ref|YP_015473.1| conjugative transfer protein TraD [Photobacterium profundum SS9] MSNQRPKNSNYTRGGQITFHNITMFFQINAKLVRWMGYGILLLTALLCFSFIDQDTLKGTYYYWRYSMVG KIKPDTHEVFTLWQGVTYKSTLGQQRLNPVFIDANRQFWLSLQLYLLASLISGLTVFSLAMRYFKKKGDE QTDDHFIRGIQIATPPELARILKKANKQSDFALDGHKIFKQHFECQHLLFDGTTGSGKSVALRKFLRWIK NRGDKAIIYDKGCTFVSKFYNPETDIILNAFDERCAYWDVWCDAKDATDFENMSAALIPMHGDGDPFWVQ SARTIFTSTAYKMVNEPNRTTERLLELMLTSELESLSEYLKGTESASLVSDKIQKTAISIKSVLAAYIKS LRFLEGLDRKDDQGNLVRPRFSIREWVKNKDENGFLFLSSNAQQHASLRPLLSMWLSIASTSILEQEEDH DRRIWVVMDEAPSLHKLPELAETIAEVRKFGGCYVIGIQSFAQLKKIYGTNAALEMFDLLNTRFFFRSPS NEMAKISSQDLGEQEMDISKENYSYGAHAMRDGISLGHQTITRPAVTPSEIMQLDDLQCWLRSPGDFPIT KLDLKFDKMRSICPPFIRREYASSETMQSIEHMLTYCQISALNLLSSDDQNKLMSVHTGQFDDDTERNAE EERMKATIDKAKAAKKKHVDKEKDTKNVKEKEAEKKVKALEQADGQAVTEQLFQEEQNINAMDHDMVDFG E |
| Nucleotide Sequence: 2106 bp [Download] |
| >gi|47104025|ref|NC_005871.1|:19147-21252 Photobacterium profundum SS9 plasmid pPBPR1, complete sequence ATGAGTAATCAACGGCCTAAAAACAGCAACTACACCCGTGGCGGGCAAATCACTTTCCACAATATCACCA TGTTCTTTCAAATTAATGCCAAGCTCGTTCGCTGGATGGGGTACGGCATCCTCCTGCTCACCGCCCTGCT GTGTTTTTCTTTTATCGATCAAGACACCTTAAAAGGCACCTATTACTACTGGCGTTACAGCATGGTCGGC AAAATAAAACCCGACACCCACGAGGTCTTCACCCTCTGGCAAGGCGTCACTTATAAAAGCACCCTGGGCC AGCAACGGCTCAATCCTGTATTCATTGACGCCAATCGCCAATTTTGGCTGTCACTGCAACTGTACCTTCT TGCCAGCCTGATAAGCGGCCTAACGGTCTTTAGCCTTGCCATGCGGTATTTCAAAAAGAAAGGGGATGAA CAAACCGATGACCACTTTATTCGTGGAATACAAATAGCCACCCCGCCCGAGCTGGCTCGCATCCTCAAGA AAGCCAATAAGCAGTCAGATTTCGCGCTCGATGGGCACAAAATCTTCAAGCAGCACTTTGAATGCCAGCA CCTACTGTTCGACGGCACCACGGGATCAGGCAAATCGGTGGCACTGCGCAAGTTTCTGCGTTGGATTAAA AATCGAGGCGATAAAGCCATCATTTACGACAAAGGCTGTACCTTCGTCAGTAAATTCTACAACCCGGAAA CCGACATCATTCTCAATGCCTTTGATGAACGCTGCGCTTACTGGGATGTATGGTGCGATGCCAAGGATGC CACTGACTTTGAAAACATGTCAGCCGCGCTCATTCCGATGCACGGCGATGGCGATCCGTTTTGGGTGCAA TCTGCCCGCACGATTTTCACCTCCACCGCTTACAAGATGGTGAATGAGCCAAACCGGACGACTGAACGCC TGCTCGAACTCATGTTGACCTCAGAGCTGGAGTCGCTCAGTGAATACCTTAAAGGCACGGAATCCGCGTC ACTGGTCTCGGATAAAATCCAAAAAACAGCGATATCCATCAAATCGGTATTGGCCGCCTACATCAAATCC CTGCGATTTTTAGAAGGACTCGATAGGAAAGATGATCAAGGCAACCTAGTACGCCCACGATTTTCTATTC GGGAGTGGGTGAAAAACAAAGATGAAAACGGCTTCCTGTTCTTGTCCAGCAACGCCCAACAACACGCCTC TTTACGCCCATTATTGTCCATGTGGTTATCCATCGCCTCCACCTCCATCTTGGAGCAAGAAGAAGATCAC GACCGCCGGATTTGGGTGGTCATGGATGAAGCCCCGAGCTTGCATAAACTGCCGGAGCTGGCCGAGACCA TTGCCGAAGTGCGTAAATTCGGTGGCTGCTATGTCATTGGTATTCAGTCCTTTGCCCAGCTTAAGAAAAT CTACGGCACCAATGCAGCACTGGAAATGTTTGATTTGTTGAACACCCGCTTCTTTTTCCGCTCACCGTCC AACGAAATGGCCAAGATTTCCTCGCAGGATTTGGGGGAGCAGGAAATGGACATTTCCAAAGAGAATTACA GCTACGGTGCCCATGCCATGCGTGATGGTATTTCACTGGGACACCAGACCATCACCCGCCCTGCAGTGAC CCCCTCAGAAATCATGCAATTGGATGATTTACAGTGTTGGCTTCGCAGTCCAGGGGATTTCCCTATCACC AAACTTGATCTCAAATTCGACAAAATGCGCTCAATCTGCCCCCCCTTCATTCGACGTGAATATGCCTCGT CAGAGACCATGCAGTCTATCGAACACATGCTGACCTATTGCCAAATCAGTGCGCTCAATCTGCTGTCATC GGATGATCAAAACAAGTTGATGTCAGTACATACCGGACAATTTGACGATGACACTGAACGTAATGCAGAA GAAGAACGCATGAAAGCCACCATTGACAAGGCCAAGGCTGCGAAGAAAAAGCACGTCGATAAAGAAAAAG ACACCAAGAACGTCAAAGAGAAAGAAGCGGAAAAAAAAGTAAAAGCTCTGGAGCAAGCTGACGGTCAAGC CGTTACCGAACAATTATTCCAGGAAGAGCAAAATATTAATGCCATGGATCATGACATGGTTGATTTCGGC GAGTAA |