SecReT4
Protein ID: 326326044
T4SS name [ID]Tra_F [513]
Gene symbol-
Locus tagVIBNI_0112
StrainVibrio nigripulchritudo plasmid VIBNI_pA (NC_015156)
Repliconplasmid VIBNI_pA [GenBank: NC_015156] [Browse all T4SS(s) in this replicon]
Location [Strand]120381..122456 [-]
ProductPutative conjugative transfer protein traD
Component typeTraD_F
UniProt IDF0V140
KEGG IDNA
PDB IDNA
Domain hit(s) vs Pfam TrwB_AAD_bind [PF10412], Evalue: 1.3e-149, Aligned region: 184..577
TraG-D_C [PF12696], Evalue: 4.6e-18, Aligned region: 436..558
TraD_N [PF12615], Evalue: 9.9e-17, Aligned region: 37..130
AAA_10 [PF12846], Evalue: 6.7e-16, Aligned region: 201..261
AAA_10 [PF12846], Evalue: 6.7e-16, Aligned region: 412..511
T4SS-DNA_transf [PF02534], Evalue: 1.6e-13, Aligned region: 266..560
Protein Sequence: 691 a.a.     [Download]
>gi|326326044|ref|YP_004250853.1| Putative conjugative transfer protein traD [Vibrio nigripulchritudo]
MSTPLRDKSGHMTRGGQITFHALRMFFQVNQALIRIVSWGVGIATLLLTLYRAPSSAWQAEFYYWRNILY
ADFGKSLDSRVSTLWQGERYSDTLGAQLTNPTLLALHDTLWFQIQVHFLLSLLTGFIVFALALRFFRQRG
QAQSLDVHIRGFQLAPPHEVTQSLKARAKRNRRRGYEDGRLSDFRIDGLALLKQHFEVQHLGLIGTTGAG
KSVMIRKLVAWIRQRGDKAIIYDKGCTFVSKFYDPSTDTILNPFDVRCANWTLWSDASDAPDFENMAAAL
IPQHGEGDPFWVDSARTIFASTAFQMMRDQKPCTNVRLLNLLLTSELEMLGSFLKGTESASLVSNDIKKT
AISIKSVLATYIKSLRFLDGLEHSSRPKSLTKPFSITQWIHDEQQKGFLFLSSNARQHASLRPLISMWLA
IASNAILGLDENSDRRIWVIMDEMPSLHKLPELGAIIAEVRKFGGCYLIGIQSYAQLLKTYGRNAADEMF
DLLNSRFFFRAPSAQMAEISSRDLGEQEVDLSKENVSYGANTLRDGVSLGHQTVTRRVVSPSEIQGLDDL
ECYLRTPGSEYITKLDLHYDRMANVAPAFDKRDWTLSAGMKKAYEESVYYECVAPGLHLSEADRKALLRA
QEARYEDEMEMRTETKSMQRAMKSDTVSDLIARDTQEKHYQESSQRELDEAAITDLGEFAD
 
Nucleotide Sequence: 2076 bp     [Download]
>gi|326325966|ref|NC_015156.1|:c122456-120381 Vibrio nigripulchritudo plasmid VIBNI_pA, complete genome
ATGTCTACACCACTGCGCGACAAAAGTGGCCACATGACCCGAGGTGGTCAAATCACGTTTCACGCTTTAA
GGATGTTTTTCCAGGTCAACCAAGCACTGATCCGTATCGTCAGCTGGGGAGTGGGCATTGCCACTCTCCT
GCTGACACTCTATCGCGCGCCATCCAGCGCGTGGCAGGCTGAATTCTATTACTGGCGTAATATTCTGTAC
GCCGATTTCGGCAAATCGTTAGACAGTCGGGTCAGCACGCTTTGGCAAGGCGAGCGGTACTCTGACACGT
TAGGCGCTCAGTTGACCAACCCTACTTTGCTGGCGCTGCACGACACGTTGTGGTTCCAGATCCAGGTGCA
CTTTTTACTGAGTTTGCTGACGGGATTTATCGTGTTCGCCCTGGCGCTGCGTTTCTTTCGTCAACGCGGT
CAGGCACAAAGTCTGGACGTCCACATTCGAGGTTTTCAGCTCGCTCCCCCACACGAAGTCACACAAAGCC
TGAAGGCGCGAGCAAAACGCAATCGACGCCGGGGATACGAAGACGGACGGCTCTCCGATTTTCGCATTGA
TGGGCTGGCGTTGCTCAAACAGCACTTTGAAGTGCAGCACCTCGGGCTGATCGGCACCACTGGAGCTGGC
AAAAGCGTGATGATTCGCAAGCTGGTGGCGTGGATCCGTCAGCGTGGCGACAAAGCCATCATTTATGACA
AGGGCTGCACCTTTGTCAGCAAGTTTTATGACCCCAGCACCGACACCATTCTGAATCCGTTCGATGTGCG
TTGTGCCAACTGGACGCTTTGGAGTGATGCAAGCGATGCCCCCGATTTCGAAAATATGGCCGCTGCTCTG
ATCCCTCAGCACGGCGAAGGCGACCCTTTCTGGGTGGATTCGGCGCGCACCATATTCGCCAGTACCGCGT
TTCAAATGATGCGCGACCAAAAGCCCTGCACTAATGTCCGGCTGCTGAATCTGTTGCTGACGTCAGAACT
TGAGATGCTGGGCAGCTTTTTGAAAGGCACAGAGTCGGCCTCGCTGGTGTCCAATGACATCAAAAAAACC
GCCATTTCCATCAAGTCGGTGCTCGCCACTTACATTAAAAGCCTGCGCTTTCTTGACGGACTGGAGCACA
GCAGCCGACCCAAATCCCTCACTAAACCGTTCTCCATTACCCAGTGGATCCACGACGAACAGCAAAAAGG
ATTTTTGTTTCTGTCGAGCAATGCCCGGCAGCATGCATCGTTGCGCCCCTTAATTTCCATGTGGCTTGCC
ATCGCTTCCAACGCCATTCTGGGTCTCGATGAGAACAGCGATCGGCGCATCTGGGTCATCATGGACGAAA
TGCCCAGTCTGCATAAGTTGCCTGAACTCGGTGCCATCATCGCCGAAGTGCGCAAGTTTGGGGGCTGTTA
CCTCATCGGCATTCAATCTTATGCCCAGCTACTGAAAACCTACGGGCGCAATGCCGCTGACGAGATGTTT
GATTTGTTGAATAGCCGATTTTTCTTTCGCGCCCCTTCGGCGCAGATGGCAGAGATCTCGTCTCGGGACC
TCGGAGAGCAGGAAGTGGACTTGTCCAAAGAAAACGTGTCTTACGGAGCCAATACGCTGCGGGACGGGGT
CTCACTGGGCCACCAAACGGTCACTCGCCGGGTGGTGTCCCCGAGTGAAATTCAGGGACTGGACGACCTT
GAATGTTACCTTCGAACGCCGGGCAGTGAATACATCACTAAGCTCGATCTGCATTACGACCGCATGGCAA
ACGTGGCTCCTGCGTTTGATAAACGAGACTGGACACTCTCTGCAGGCATGAAAAAAGCGTATGAGGAAAG
CGTGTATTACGAATGCGTTGCCCCGGGGCTGCATCTGTCCGAAGCCGATCGTAAAGCACTGCTGCGCGCG
CAGGAAGCACGCTACGAAGACGAGATGGAAATGCGCACAGAGACCAAATCCATGCAACGGGCGATGAAAA
GCGACACGGTGTCCGATCTTATCGCCCGGGATACCCAAGAAAAACACTATCAAGAAAGCTCACAACGCGA
GCTCGATGAAGCCGCCATTACCGACTTAGGCGAATTCGCCGACTGA