| Protein ID: 317053480 |
 T4SS name [ID] | Tra_F [126] |
| Gene symbol | - |
| Locus tag | Pat9b_4721 |
| Strain | Pantoea sp. At-9b plasmid pPAT9B02 (NC_014839) |
| Replicon | plasmid pPAT9B02 [GenBank: NC_014839] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 65..2677 [+] |
| Product | type IV conjugative transfer system coupling protein TraD |
| Component type | TraD_F |
| UniProt ID | E6WKX3 |
| KEGG ID | pao:Pat9b_4721 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 2.7e-139, Aligned region: 180..568 TraG-D_C [PF12696], Evalue: 2.4e-19, Aligned region: 426..549 TraD_N [PF12615], Evalue: 2.8e-13, Aligned region: 31..136 T4SS-DNA_transf [PF02534], Evalue: 1e-11, Aligned region: 338..511 AAA_10 [PF12846], Evalue: 4.3e-09, Aligned region: 406..505 |
| Protein Sequence: 870 a.a. [Download] |
| >gi|317053480|ref|YP_004118614.1| type IV conjugative transfer system coupling protein TraD [Pantoea sp. At-9b] MSFTPKNLTQGGQMTAYRLRMFGQVSNWIFHWILLLFIAAVAVLFWLTTPDDVLRNGFWYWAAWPSHSLL NLAPGTTTATWDILWHCGDGAQLCTTKMTPAQLLADPWMRSMGDAFLAGLKFLATVCGITAFVLWCLIAW YVGRIGKKESEDEFISGMTLTDNLQEVNRQLKKAGEKSDLQIGGLHMVKNAEVMNYLIHGTIGVGKSTPI RWLLDYIRRRGDRAIVYDSGGTFIETHYDPSRDKILNAHDRRCENWVLWREARDVVDYENMTAALMPVEG DSDPFWVSSSRTIFSDTAMQFASRPDRSIETFLKTCLSIDLKSLREFLKNTPSANLVEEKIEKTAISIRS VLTNYAKSLRYLQGLDKEGKPEFSIREWMTDAQYDSSWLFIATTARHRKAVRPLISMWLSLATLLLQSMG ENSDRRVWFIGDEIASLQKIPELNETLAEARKFGGCFVLGIQNIPQLVHIYGREMAKAIFDLLNTRAYGR SPSAEVAKMVEEELGHQRRREAREQNSYGLDQVRDGIAISKDRVNEPIVDYDLIMKMPNLRFYIRLPGEY PVVKLSLKYRPQKKHHPALIERDFRDRLSPELEAIISGNERAAVAADIRFPTGEEILEAGNVQSVQKVPE PVAVPASPVTVRKVTDTTPVPGGTDIARDTRPVIMPFLPEASLPPSVRETSAGRGDLPTNVRPFPARQGI PVTAPDVTEALLSQARSAESRSGHDATVPSHTPAPLPEVRPAPSPAAPAPPVSPQSRPAPAALSALDMLA RRTKKPAAAESDADASSGDAQGEAPELNMQAEKDEAGRLTVRSAGHRKTDPESREEAYAAQYGRANQQMA DEELNILRHREDDEAYQAMSQHHEPGGHER |
| Nucleotide Sequence: 2613 bp [Download] |
| >gi|317053479|ref|NC_014839.1|:65-2677 Pantoea sp. At-9b plasmid pPAT9B02, complete sequence ATGAGTTTCACCCCGAAAAACCTCACGCAGGGCGGCCAGATGACGGCCTACCGCCTGCGCATGTTTGGGC AGGTCAGCAACTGGATATTTCACTGGATACTGCTGCTGTTCATCGCTGCCGTGGCGGTGCTGTTCTGGCT GACCACGCCCGACGACGTGCTGCGTAACGGCTTCTGGTACTGGGCGGCGTGGCCGTCTCATTCCCTGCTG AATCTCGCACCCGGCACCACCACGGCCACCTGGGACATCCTGTGGCACTGCGGCGACGGGGCGCAGCTGT GCACCACGAAGATGACGCCGGCACAGCTGCTGGCAGATCCCTGGATGCGGTCGATGGGCGACGCGTTTCT GGCCGGCCTGAAGTTTCTGGCAACGGTCTGCGGCATTACCGCCTTTGTCCTGTGGTGCCTGATTGCCTGG TACGTGGGGCGCATCGGGAAGAAGGAGAGCGAGGACGAGTTTATTTCCGGCATGACGCTGACGGACAACC TGCAGGAGGTGAACCGCCAGCTGAAGAAGGCGGGAGAAAAATCCGACCTGCAGATTGGTGGCCTGCATAT GGTGAAGAACGCCGAGGTCATGAACTATCTCATTCACGGCACCATCGGCGTGGGCAAATCGACGCCCATC CGCTGGCTGCTGGACTACATCCGCCGGCGCGGTGACCGCGCGATCGTTTACGACTCAGGCGGCACCTTCA TTGAGACGCACTATGACCCAAGCCGCGACAAGATCCTGAACGCGCACGACCGCCGCTGTGAGAACTGGGT GCTGTGGCGCGAGGCGCGTGACGTGGTCGATTACGAGAACATGACGGCGGCGCTGATGCCGGTGGAGGGC GACTCTGACCCGTTCTGGGTGTCCTCCTCGCGCACCATCTTCAGCGACACGGCCATGCAGTTTGCGTCCC GCCCGGACCGCAGTATCGAGACGTTCCTGAAGACCTGCCTCTCCATCGATCTGAAAAGTCTGCGTGAGTT TCTGAAGAACACCCCGTCGGCCAACCTGGTTGAGGAGAAAATTGAGAAGACGGCCATCTCCATTCGCTCG GTGCTCACCAACTACGCCAAGTCGCTGCGGTATCTGCAGGGGCTGGATAAGGAGGGCAAGCCGGAGTTCA GCATCCGCGAGTGGATGACAGACGCGCAGTACGACAGCAGCTGGCTGTTTATCGCCACCACGGCCCGCCA CCGCAAGGCGGTCCGGCCGCTGATTTCCATGTGGCTGTCGCTGGCCACGCTGCTGCTGCAGAGCATGGGC GAGAACAGCGATCGCCGCGTGTGGTTCATCGGCGATGAGATAGCGAGTCTGCAGAAGATACCGGAGCTCA ACGAAACGCTGGCCGAGGCGCGCAAGTTCGGCGGCTGCTTTGTGCTGGGTATCCAGAACATCCCGCAGCT GGTGCATATCTACGGCCGGGAGATGGCCAAGGCCATCTTTGACCTGCTGAACACCCGCGCCTACGGCCGT TCTCCGAGCGCCGAGGTGGCGAAAATGGTGGAGGAGGAACTGGGTCACCAGCGGCGGCGTGAGGCGCGCG AGCAGAACAGCTACGGCCTGGATCAGGTCCGTGACGGTATCGCGATCAGCAAGGACAGGGTCAACGAACC CATCGTGGACTACGACCTGATCATGAAAATGCCCAACCTGCGTTTTTACATACGCCTGCCGGGTGAGTAC CCGGTGGTGAAACTGAGCCTGAAGTACCGCCCGCAGAAGAAGCATCACCCGGCGCTGATTGAGCGCGACT TCCGTGATCGCCTGAGTCCGGAGCTCGAAGCCATCATTTCCGGCAACGAGCGGGCCGCCGTCGCTGCGGA TATCCGCTTCCCGACCGGGGAGGAAATTCTGGAAGCCGGCAACGTGCAGTCAGTACAGAAAGTCCCTGAA CCGGTGGCAGTCCCCGCCAGCCCCGTGACGGTCAGGAAGGTGACGGATACCACGCCGGTGCCGGGCGGGA CAGACATCGCGCGGGACACCCGGCCTGTCATTATGCCTTTTTTACCGGAGGCGTCACTGCCGCCTTCGGT ACGGGAAACGTCAGCGGGCAGGGGAGATCTTCCGACAAACGTCAGACCGTTCCCGGCCCGTCAGGGCATT CCGGTCACTGCCCCAGATGTGACTGAGGCACTGCTCTCACAGGCGCGGTCCGCGGAAAGCCGCTCCGGGC ATGACGCGACTGTCCCGTCACACACGCCGGCCCCTCTCCCGGAGGTGCGGCCGGCACCGAGTCCTGCAGC ACCGGCACCTCCCGTTTCCCCGCAGTCACGCCCGGCACCGGCAGCCCTGAGCGCGCTGGACATGCTGGCC CGCCGGACAAAAAAGCCGGCGGCCGCAGAGAGTGACGCTGACGCGTCCTCCGGTGACGCGCAGGGGGAGG CCCCGGAACTGAACATGCAGGCGGAAAAGGATGAGGCCGGAAGGCTGACCGTGCGCAGCGCCGGGCACCG TAAGACCGACCCTGAGAGCCGGGAAGAAGCGTATGCCGCGCAGTACGGCAGGGCAAATCAGCAGATGGCG GATGAGGAGCTGAACATCCTGCGCCATCGCGAAGATGACGAAGCGTATCAGGCCATGAGCCAGCACCATG AACCCGGAGGGCATGAGCGATGA |