| Protein ID: 317052865 |
 T4SS name [ID] | Tra_F [127] |
| Gene symbol | - |
| Locus tag | Pat9b_4095 |
| Strain | Pantoea sp. At-9b plasmid pPAT9B05 (NC_014842) |
| Replicon | plasmid pPAT9B05 [GenBank: NC_014842] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 83649..86291 [+] |
| Product | type IV conjugative transfer system coupling protein TraD |
| Component type | TraD_F |
| UniProt ID | E6WNU0 |
| KEGG ID | pao:Pat9b_4095 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 9.5e-141, Aligned region: 180..568 TraG-D_C [PF12696], Evalue: 1.3e-19, Aligned region: 426..549 TraD_N [PF12615], Evalue: 1.3e-12, Aligned region: 31..136 AAA_10 [PF12846], Evalue: 1.1e-11, Aligned region: 195..233 AAA_10 [PF12846], Evalue: 1.1e-11, Aligned region: 403..505 T4SS-DNA_transf [PF02534], Evalue: 3.6e-11, Aligned region: 337..548 |
| Protein Sequence: 880 a.a. [Download] |
| >gi|317052865|ref|YP_004119631.1| type IV conjugative transfer system coupling protein TraD [Pantoea sp. At-9b] MSFTPKNLTQGGQMTAYRLRMFGQVSNWIFHWILLLFIAAVAVLFWLTTPDDVLRNGFWYWAAWPSHSLL GLAPGTTTATWDILWHCGDGTSLCTTKMTPVQLLADPWMQAMGDAFVASLKFLATVCGITAFALWCLIAW FVGRIGKKESEDEFISGMTLTDQPKEVNRLLKKAGEKSDLQIGGLHMVKNAEVMNFLIHGTIGVGKSTLI RWLLDYIRRRGDRAIIYDSGGTFIETHYNPRRDKILNPHDSRCENWVLWRECREVVDYENLTAALMPVEG DSDPFWVSSSRTIFSDGAMQFAADPARSIETFLKTLLSIDLKSLREFLKNTPSANLVEEKIEKTAISIRS VLTNYAKSLRYLQGLDKEGKPEFSIREWMTGAQYDSSWLFISTTARHRRAVRPLISMWLSLATLLLQSMG ENSGRRVWFIGDEIASLQKIPELNETLAEARKFGGCFVLGVQNIPQLVHIYGREMAKAIFDLLNTRAYGR SPSAEVAKMVEEELGHQRRREAREQNSYGLDQVRDGISISKDKVNEPVVDYDLIMKMPNLRFYMRLPGEY PVVKLSLKYRKQRKSHRALIERDFRDRLSPELERIIESNERSARAADISFPTGEEILEAGNVQSVQKVPE PVAVPASPVTVRKVTDTTPAPGGADIARDTLPVIKPFLPEASLPAPVRETSAGREDLPANVRPFPARQAV PVTAPYVTEARRPQARSAESRSGHDATVPSHTPALLPEVRPEAVPAVPVPPVFPSPRPAAQPVKPSRPAP TALSALDMLARRTKKPAAAESDADASSGDAQGEAPELNMQAEKDEAGRLTVRSAGHRKTDPESREEAYAA QYGRANQQMADEELNILRHREDDETYQAMSQHHEPGGHER |
| Nucleotide Sequence: 2643 bp [Download] |
| >gi|317052773|ref|NC_014842.1|:83649-86291 Pantoea sp. At-9b plasmid pPAT9B05, complete sequence ATGAGTTTCACCCCGAAAAACCTCACGCAGGGCGGCCAGATGACGGCCTACCGCCTGCGCATGTTTGGTC AGGTCAGCAACTGGATATTTCACTGGATACTGCTGCTGTTCATTGCCGCCGTGGCGGTGCTGTTCTGGCT GACCACGCCCGATGACGTGCTGCGAAACGGCTTCTGGTACTGGGCCGCGTGGCCGTCTCATTCGCTGCTG GGGCTCGCCCCCGGCACCACTACGGCCACCTGGGACATCCTGTGGCACTGCGGTGACGGGACGTCGCTGT GCACCACGAAAATGACTCCGGTACAGCTGCTGGCCGATCCGTGGATGCAGGCAATGGGTGACGCGTTTGT GGCCAGCCTGAAATTTCTGGCGACGGTCTGCGGCATCACGGCCTTTGCCCTGTGGTGCCTGATCGCCTGG TTCGTGGGGCGCATCGGGAAAAAGGAGAGCGAGGACGAGTTCATCTCCGGCATGACGCTGACCGACCAGC CAAAAGAAGTGAACCGTCTGCTGAAGAAGGCGGGCGAGAAGTCCGACCTGCAGATTGGCGGGCTACATAT GGTGAAGAACGCCGAGGTGATGAACTTCCTCATCCACGGCACCATCGGTGTCGGTAAGTCCACGCTCATC CGCTGGCTGCTGGACTACATCCGTCGCCGCGGTGACCGCGCCATTATCTATGACTCCGGCGGCACCTTCA TTGAAACGCACTACAACCCGCGCCGCGACAAAATCCTCAACCCGCACGACAGCCGCTGTGAAAACTGGGT GCTGTGGCGCGAGTGTCGGGAAGTGGTTGATTACGAGAACCTGACGGCGGCGCTGATGCCGGTGGAGGGG GACTCTGATCCGTTCTGGGTGTCTTCCTCGCGCACCATCTTCAGCGACGGTGCGATGCAGTTCGCGGCCG ACCCGGCGCGCAGCATTGAGACGTTCCTGAAGACCCTGCTCTCCATTGACCTGAAAAGCCTGCGCGAATT TCTGAAGAACACGCCGTCGGCCAACCTGGTCGAGGAAAAAATCGAGAAGACGGCCATCTCCATTCGTTCG GTGCTCACCAACTACGCCAAATCGCTGCGTTATCTGCAGGGGCTGGATAAAGAGGGCAAGCCGGAGTTCA GCATCCGCGAGTGGATGACCGGTGCGCAGTACGACAGCAGCTGGCTGTTTATCTCCACCACGGCCCGCCA CCGCAGGGCGGTGCGTCCGCTGATTTCCATGTGGCTGTCGCTGGCCACGCTGCTGCTGCAGAGCATGGGC GAGAACAGCGGGCGCCGCGTGTGGTTCATCGGTGATGAAATCGCCAGCCTGCAGAAAATCCCCGAGCTCA ACGAAACGCTGGCGGAGGCCCGCAAGTTCGGCGGCTGTTTTGTGCTGGGTGTCCAGAACATCCCGCAGCT GGTGCACATCTACGGTCGCGAGATGGCCAAAGCCATTTTCGACCTGCTGAACACCCGTGCTTACGGGCGT TCACCCAGTGCTGAGGTGGCGAAGATGGTAGAGGAGGAACTGGGTCACCAGCGCCGGCGCGAGGCGCGTG AGCAGAACAGTTACGGCCTGGATCAGGTCCGTGACGGTATCTCCATCAGCAAAGACAAGGTCAATGAGCC CGTCGTGGACTACGACCTGATCATGAAAATGCCGAACCTGCGCTTTTACATGCGCCTGCCGGGTGAGTAT CCGGTGGTGAAGCTCAGCCTGAAATACCGGAAGCAGAGAAAGTCTCACCGGGCGCTCATTGAACGTGACT TCCGCGACCGGCTGAGTCCGGAGCTTGAGCGGATCATCGAGAGCAACGAGCGCAGCGCCCGCGCGGCAGA CATTTCGTTCCCGACCGGGGAGGAAATTCTGGAAGCCGGCAACGTGCAGTCAGTACAGAAAGTCCCTGAA CCGGTGGCAGTTCCCGCCAGCCCCGTGACGGTCAGGAAGGTGACGGATACCACGCCGGCGCCGGGCGGGG CAGACATCGCGCGGGACACCCTGCCTGTCATTAAGCCTTTTTTACCGGAGGCGTCACTGCCGGCTCCGGT CCGTGAAACGTCAGCGGGCAGGGAGGATCTTCCTGCAAACGTCAGACCGTTCCCGGCCCGTCAGGCTGTT CCGGTCACTGCCCCTTATGTGACTGAGGCACGGCGCCCGCAGGCGCGGTCCGCAGAAAGCCGGTCCGGGC ATGACGCGACTGTCCCGTCACACACGCCGGCACTTCTCCCGGAGGTCCGGCCGGAAGCGGTCCCTGCAGT GCCGGTACCTCCCGTTTTCCCGTCGCCACGCCCGGCTGCTCAGCCTGTAAAACCCTCACGCCCGGCACCG ACAGCCCTGAGCGCGCTGGACATGCTGGCCCGCCGGACAAAAAAGCCAGCGGCCGCAGAGAGTGACGCTG ACGCGTCCTCCGGTGACGCGCAGGGGGAGGCCCCGGAACTGAACATGCAGGCGGAAAAGGATGAGGCCGG CAGGCTGACCGTGCGCAGCGCCGGGCACCGTAAAACCGACCCGGAGAGCCGGGAAGAAGCGTATGCCGCG CAGTACGGCAGGGCAAATCAGCAGATGGCGGATGAGGAGCTGAACATCCTGCGCCATCGCGAAGATGACG AAACGTATCAGGCCATGAGTCAGCACCATGAACCCGGAGGACATGAGCGATGA |