| Protein ID: 305696937 |
 T4SS name [ID] | Tra_F [82] |
| Gene symbol | TraD |
| Locus tag | pYT1_p109 |
| Strain | Salmonella enterica subsp. enterica serovar Typhimurium plasmid pYT1 (NC_014476) |
| Replicon | plasmid pYT1 [GenBank: NC_014476] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 100203..102365 [+] |
| Product | conjugative transfer DNA transport protein |
| Component type | TraD_F |
| UniProt ID | E0D8I6, D0R7G4 |
| KEGG ID | NA |
| PDB ID | NA |
| Domain hit(s) vs Pfam | TrwB_AAD_bind [PF10412], Evalue: 2.1e-143, Aligned region: 172..561 TraD_N [PF12615], Evalue: 2.3e-33, Aligned region: 31..129 TraG-D_C [PF12696], Evalue: 1.2e-18, Aligned region: 419..541 T4SS-DNA_transf [PF02534], Evalue: 6.4e-10, Aligned region: 394..505 AAA_10 [PF12846], Evalue: 5.4e-07, Aligned region: 398..491 |
| Protein Sequence: 720 a.a. [Download] |
| >gi|305696937|ref|YP_003864252.1| conjugative transfer DNA transport protein [Salmonella enterica subsp. enterica serovar Typhimurium] MSFNAKDMTQGGQIASMRIRMFSQIANIIFYCLFIFFWILVGLVLWVKLSWQTFVNGGIYWWCTTLEGMR DLIKSQPVYEIRYYGQTFRMNAAQVLQDKYTVWCGEQLWSAFVLAACVALVICLITFFMTTWILGRQGKQ QSEDDVTGGRQLTDNPKDVARMLKKDGKASDILIGDLPIIKDSEIQNFLLHGTVSTGKSEIIRRLANYAR QRGDMVVMYDRSCEFVKSYYDPSIDKILNPCDARCAAWDLWRECLTLPDFDNAANTLIPMGTKEDPFWQG SGRTIFAEAAYLMRNDSDRSYSKLVDTLLSIKIEKLRTYLRDSPAANLVEEKIEKTAISIRAVLTNYVKA VRYLQGIERNGEPFTIRDWMRGVREDQKNGWLFISSNADTHSSLKPVISMWLSIAIRGLLAMGENRNRRV WFFCDELPTLHKLPDLVEIVPEARKFGGCYVFGIQSSTQMEDIYGEKAAATLLDVMNTRAFFRSPSYKIA DYVAHEIGEKEILKASEQYSYGADPVRDGVSTGKEMERVTLVSYSDIQSLPDLTCYVTLPGPYPAVKLAL KYQERPKVAPEFIPREMNPEAEARLSAVLAAREAEVRQMSSLFEPDTEAVAPTAAEAQAEQPQQPQPTVV SDKKSAAAGTAVNTPAGGVGQELKMKPEDEEQPLPPGINASGEVVDMAAYERWRQEQEVNTQQQMQRREE VNINVHRGHGKDEPEPGDDF |
| Nucleotide Sequence: 2163 bp [Download] |
| >gi|305696832|ref|NC_014476.1|:100203-102365 Salmonella enterica subsp. enterica serovar Typhimurium plasmid pYT1, complete sequence ATGAGCTTTAATGCGAAGGATATGACCCAGGGCGGTCAGATTGCGTCCATGCGTATTCGCATGTTCAGTC AGATCGCCAACATTATATTTTACTGCCTGTTTATTTTCTTCTGGATACTCGTCGGCCTAGTGTTATGGGT GAAACTCAGCTGGCAGACGTTTGTGAATGGGGGTATCTACTGGTGGTGTACCACGCTTGAAGGAATGCGG GATTTAATTAAATCCCAGCCTGTCTATGAGATCCGGTATTACGGCCAGACGTTCCGGATGAACGCCGCTC AGGTTCTGCAGGACAAATACACGGTCTGGTGTGGGGAGCAACTGTGGTCGGCCTTTGTTCTGGCCGCCTG TGTGGCGCTGGTTATCTGCCTGATTACATTTTTTATGACCACATGGATTCTGGGACGTCAGGGAAAACAG CAGAGTGAGGATGATGTTACCGGAGGACGCCAACTTACCGACAATCCGAAAGACGTTGCCAGAATGCTGA AAAAAGACGGAAAAGCGTCCGATATCCTGATTGGCGATTTGCCAATCATTAAGGATTCAGAGATTCAGAA CTTTTTGCTCCACGGGACAGTCAGTACCGGTAAGTCTGAAATCATTCGCCGGCTGGCTAACTATGCCCGT CAGCGCGGCGACATGGTGGTGATGTACGATCGTTCCTGTGAGTTTGTCAAAAGCTACTACGACCCGTCCA TCGATAAAATTCTCAACCCCTGTGACGCGCGGTGTGCCGCATGGGATTTATGGCGGGAATGCCTCACCCT GCCGGATTTTGATAATGCGGCGAATACCCTGATCCCGATGGGCACGAAGGAAGATCCGTTCTGGCAGGGT TCCGGACGGACCATTTTTGCTGAAGCGGCATACCTGATGCGTAATGACAGCGACCGCAGCTACAGTAAGC TGGTTGACACGCTGCTTTCAATCAAGATTGAAAAACTGCGAACCTACCTGCGTGATTCCCCGGCGGCCAA CCTGGTGGAAGAAAAAATCGAGAAGACGGCCATTTCCATCCGGGCTGTGCTGACCAACTACGTAAAAGCC GTCCGCTATCTTCAGGGGATCGAGCGTAACGGTGAACCGTTCACCATCCGTGACTGGATGCGTGGTGTAC GTGAAGATCAGAAGAATGGCTGGCTGTTTATTTCTTCAAACGCTGACACACATTCTTCCCTGAAGCCGGT GATTTCCATGTGGCTGTCCATTGCCATCCGGGGCCTGCTGGCGATGGGAGAGAACCGTAACCGTCGGGTG TGGTTCTTCTGTGATGAGTTGCCCACGCTGCACAAGCTGCCCGACCTCGTGGAAATTGTCCCGGAAGCCC GTAAATTCGGGGGCTGCTATGTCTTTGGTATTCAGTCCAGTACACAGATGGAGGATATCTATGGCGAGAA AGCGGCGGCAACCCTGCTGGATGTGATGAACACAAGGGCCTTTTTCCGCTCACCCAGCTATAAGATTGCC GACTATGTCGCCCATGAGATTGGTGAAAAAGAGATCCTGAAAGCCAGTGAGCAGTATTCCTATGGTGCCG ATCCCGTTCGTGACGGGGTGTCGACCGGTAAAGAGATGGAGCGTGTCACACTGGTCAGCTACTCCGATAT TCAGTCACTGCCCGACCTGACCTGTTATGTCACGCTGCCCGGACCCTATCCGGCAGTGAAGCTGGCCCTG AAATACCAGGAACGTCCCAAAGTGGCGCCGGAGTTTATTCCCCGGGAAATGAATCCGGAGGCGGAAGCCC GTCTGAGCGCCGTTCTGGCTGCAAGGGAAGCCGAGGTACGTCAGATGTCCAGCCTGTTTGAACCGGATAC AGAAGCGGTTGCGCCGACAGCAGCAGAAGCGCAGGCTGAACAGCCGCAACAGCCACAGCCCACGGTTGTC AGCGATAAAAAATCAGCAGCGGCGGGTACCGCCGTGAATACGCCTGCAGGCGGTGTCGGACAGGAACTGA AAATGAAGCCGGAAGACGAAGAGCAGCCACTGCCCCCCGGGATTAATGCGTCCGGTGAGGTGGTGGACAT GGCGGCGTATGAGCGCTGGCGGCAGGAGCAGGAGGTGAATACTCAGCAGCAGATGCAACGGCGGGAGGAG GTGAATATCAACGTTCACCGTGGGCACGGAAAGGATGAACCGGAGCCGGGAGATGATTTCTGA |